Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01] 106 sequences; 43,681,955 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq2 100 2e-16 >seq2 Length=5234762 Score = 100 bits (110), Expect = 2e-16 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 27498 GTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTC 27557 ||| || || |||||||| | ||||||||| ||||| || || || ||||||||| | || Sbjct 1830512 GTATTCCGCGCCGAAATGGCGCCATTGGAAACCGTAAACGGGGCCTAGGTCTCCCACCTC 1830571 Query 27558 CCTGTGC-TCGAAGCCCCTC-TTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATC 27615 | || || ||||| || |||| ||| || | ||| |||||| ||||||||||| Sbjct 1830572 TCGATGGGTC--AGCCCGAGATTATCCAGAAACTCGCGGGATCCGTTGCCGTCCCAGATC 1830629 Query 27616 TTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTG-GACCCTCTGACGAACCACAGCAG 27674 || | || |||| |||| | ||||| ||| ||||| || |||||||| ||| Sbjct 1830630 TTGATGCCTGCCTCGTTGAGCGGTATGGAGGAAGTGTTGCCCTC-GATGAACCACAACAG 1830688 Query 27675 CTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAA 27724 ||| | | ||| ||| |||||| | ||| ||||| || || |||| Sbjct 1830689 CTCGGCAATGACAGCCCGTGTAAAGACGCGCTTTGTCGTAAGTAGAGGAA 1830738 Score = 96.9 bits (106), Expect = 3e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 27118 GGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCT 27177 ||||| | || |||||| |||| || | || ||||| | ||||||||||| ||||| Sbjct 1830087 GGCTCTCGCTGGAGCTGTGTCTCGAGTGCCTCGACGTGGTTGAGGTAGACGTGCGCGTCG 1830146 Query 27178 CCCAGGGTGTGGA-CAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGT 27236 |||| | |||| || || || || | | || || ||||||| ||| | ||| Sbjct 1830147 CCCATGACGTGGGTCAGGCTG-CCGGGCACCAAGTCGCACACATGAGCCAGCATATGCGT 1830205 Query 27237 GAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTG 27296 ||| || | |||||| |||||||| ||||| || || ||||||||||| | || | || Sbjct 1830206 GAGCAGCGCGTAGCTTGCGATGTTGAAGGGCACGCCAAGCCCCATGTCGCAGGAGCGTTG 1830265 Query 27297 GTAGAGCTGACA 27308 |||||| || || Sbjct 1830266 GTAGAGTTGGCA 1830277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369506722642886