Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01]
106 sequences; 43,681,955 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq3 143 2e-29
seq5 141 7e-29
seq7 118 8e-22
>seq3
Length=5051094
Score = 143 bits (158), Expect = 2e-29
Identities = 157/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||||||| || ||||||||||| || |||||||| ||| | || | || |||
Sbjct 3316524 ACCAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAAAGTACGACCATCCTCC 3316465
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| || || ||||||| ||||||||| || | || | ||| ||||| |||
Sbjct 3316464 AGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGA 3316405
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||||| | | ||||| ||| |||||| ||||||| ||||| || ||
Sbjct 3316404 ATCTTGCTCTTCACGTTATCGATGGTATCGCTGGATTCGACCTCCAAGGTAATAGTTTTA 3316345
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| |||||||| ||||||||||||||
Sbjct 3316344 CCCGTCAGGGTCTTGACGAAGATTTGCAT 3316316
Score = 114 bits (126), Expect = 9e-21
Identities = 153/210 (73%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTC 44187
|||| ||| || ||||| ||||| || |||||||| ||| | || | || |||| ||
Sbjct 3316296 ACCAAGTGCAGTGTGCTTTCCTTCTGAATGTTGTAGTCGCTCAAGGTTCGGC-CGTCCTC 3316238
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|| ||||| || |||||||| | |||||| || || | ||| | || ||||| ||
Sbjct 3316237 GAGTTGCTTGCCAGCAAAGATAAGACGCTGTTGGTCAGGAGGGATGCCCTCCTTATCTTG 3316178
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||||| | | || ||||| | || || || |||| ||| ||||||||
Sbjct 3316177 GATCTTGCTCTTCACGTTGTCAATCGTGTCTGATGACTCGACTTCCAACGTGATCGTCTT 3316118
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || |||||||| ||||||||||||||
Sbjct 3316117 GCCGGTAAGGGTCTTGACGAAGATTTGCAT 3316088
Score = 107 bits (118), Expect = 1e-18
Identities = 152/212 (72%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| || || || ||| |||||| ||||||||||| |||| ||| ||| |||| ||
Sbjct 3316068 ACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCA 3316009
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
||||| || || || || |||| |||||||| || | ||| | ||| ||||| ||
Sbjct 3316008 AGCTGTTTGCCAGCGAAAATCAGGCGCTGCTGGTCAGGAGGGATACCCTCCTTGTCTTGG 3315949
Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
||||| ||| || ||| | || ||||||| | || ||||| | || |||||||
Sbjct 3315948 ATCTTTGACTTGACATTGT--CGATCGTGTCGGAGCTCTCAACCTCGAGAGTGATCGTCT 3315891
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
| || || | |||||| ||||| || ||||||
Sbjct 3315890 TGCCTGTCAAGGTCTTGACGAAAATCTGCATG 3315859
Score = 102 bits (112), Expect = 6e-17
Identities = 149/209 (71%), Gaps = 4/209 (2%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || |||| || | | ||| ||||| || ||| |||||| ||||||||||| ||
Sbjct 3315862 CATGCCACCTCGGAGGCGAAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 3315803
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| || ||| | || || |||||||| || |||||||||||||||||||| || |
Sbjct 3315802 GGACAGGGTGCGGCCATCTTCAAGCTGCTTTCCAGCAAAGATCAAACGCTGCTGGTCAGG 3315743
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGAT 44284
||| | || ||||| ||| |||||| ||| || ||| | ||||| || | |
Sbjct 3315742 AGGAATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTGT--CGATGGTATCAGAGCTC 3315685
Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGT 44313
|| ||||| | || || ||||| || ||
Sbjct 3315684 TCGACCTCGAGAGTGATGGTCTTGCCGGT 3315656
>seq5
Length=3459663
Score = 141 bits (156), Expect = 7e-29
Identities = 170/229 (74%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| || | ||| | || ||||| ||| || ||| |||||| ||||||||||| |||| |
Sbjct 1049171 CCACCACGCAGGCGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 1049112
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
|| ||| |||| || |||||||| ||||| ||||||| |||||||| || | ||
Sbjct 1049111 AGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGG 1049052
Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCA 44288
| || ||||| ||| ||||| ||| || ||| | |||||||| | || ||||
Sbjct 1049051 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT--CGATGGTGTCCGAAGACTCCA 1048994
Query 44289 CCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||| | || || ||||| |||||||||||||| ||||| || |||||
Sbjct 1048993 CCTCAAGGGTGATGGTCTTACCCGTGAGGGTCTTGACGAAAATCTGCAT 1048945
>seq7
Length=2782040
Score = 118 bits (130), Expect = 8e-22
Identities = 137/183 (75%), Gaps = 4/183 (2%)
Strand=Plus/Minus
Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207
|||| || |||||||| |||| || || | || || |||||||| || |||||||
Sbjct 1279511 CCTTCTGAATGTTGTAGTCGGACAGGGTTCGGCCATCCTCGAGCTGCTTGCCAGCAAAGA 1279452
Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGT 44265
||| ||||||||| || | ||| | ||| ||||| ||| ||||| ||| || |||
Sbjct 1279451 TCAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 1279392
Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325
| |||||||||| || |||||||| | || || ||||| ||||| |||||||||||
Sbjct 1279391 --CGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCAC 1279334
Query 44326 GAA 44328
|||
Sbjct 1279333 GAA 1279331
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359989934937402
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |