Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01]
106 sequences; 43,681,955 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq5 154 4e-32
seq7 138 3e-27
seq3 136 1e-26
>seq5
Length=3459663
Score = 154 bits (170), Expect = 4e-32
Identities = 158/205 (77%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| || || ||||| || || || |||||||| |||||||| || |||
Sbjct 1048948 CAGATTTTCGTCAAGACCCTCACGGGTAAGACCATCACCCTTGAGGTGGAGTCTTCGGAC 1049007
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || ||||| ||||| |||||||| || || ||||| || ||||||||
Sbjct 1049008 ACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAG 1049067
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || |||||||||||||| |||||||| || || | || || |||| || ||| ||
Sbjct 1049068 CGCCTGATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAACATC 1049127
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || || || || ||||| ||||
Sbjct 1049128 CAGAAGGAGTCCACCCTGCA-CTTG 1049151
>seq7
Length=2782040
Score = 138 bits (152), Expect = 3e-27
Identities = 142/186 (76%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 177923 CCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGA 177982
||| | ||||||||| || || || || || || ||||||||||||||||| || ||
Sbjct 1279324 CCACAGTTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCCGA 1279383
Query 177983 CACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCA 178042
||||||||| || ||||| ||||| |||||||| || || |||||||| ||||||||
Sbjct 1279384 CACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAGCA 1279443
Query 178043 ACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGT 178102
|| || ||||| || || || |||||||| ||||| | || || |||| || ||| |
Sbjct 1279444 GCGTCTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGAACCCTGTCCGACTACAACAT 1279503
Query 178103 CCAAAA 178108
|| ||
Sbjct 1279504 TCAGAA 1279509
>seq3
Length=5051094
Score = 136 bits (150), Expect = 1e-26
Identities = 141/185 (76%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAA 178004
|| || || || ||||| |||||||| || ||||| || |||||||| || |||||
Sbjct 3315656 ACCGGCAAGACCATCACTCTCGAGGTCGAGAGCTCTGATACCATCGACAATGTCAAGTCG 3315715
Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064
|||||||||||||| || || || ||||| |||||||| || | ||||| || |||||
Sbjct 3315716 AAGATTCAGGACAAGGAGGGCATTCCTCCTGACCAGCAGCGTTTGATCTTTGCTGGAAAG 3315775
Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124
||||| |||||||| | || || |||| || ||| |||| || || || || || ||
Sbjct 3315776 CAGCTTGAAGATGGCCGCACCCTGTCCGACTACAACATCCAGAAGGAGTCCACCCTCCAC 3315835
Query 178125 CTTGT 178129
|||||
Sbjct 3315836 CTTGT 3315840
Score = 114 bits (126), Expect = 3e-20
Identities = 138/188 (73%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || || || || || ||||| || ||| | ||||| ||| | ||
Sbjct 3316319 CAAATCTTCGTCAAGACCCTGACGGGTAAAACTATTACCTTGGAGGTCGAATCCAGCGAT 3316378
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| ||||| || |||||||||||||| || || ||||| || ||||||||
Sbjct 3316379 ACCATCGATAACGTGAAGAGCAAGATTCAGGACAAGGAGGGTATCCCCCCTGACCAGCAG 3316438
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || |||||||| || || ||||| || ||||| | ||| | ||| || ||| |
Sbjct 3316439 CGTCTGATCTTCGCTGGTAAGCAGCTGGAGGATGGTCGTACTTTGAGCGACTACAACATT 3316498
Query 178104 CAAAAAGA 178111
|| || ||
Sbjct 3316499 CAGAAGGA 3316506
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203729565182564
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |