Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metarhizium_20robertsii_20[genbank_20GCA_5F000591435.1_202014-03-17] 367 sequences; 40,317,276 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq3 123 3e-23 >seq3 Length=2231953 Score = 123 bits (136), Expect = 3e-23 Identities = 206/297 (69%), Gaps = 3/297 (1%) Strand=Plus/Plus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 || || |||||||| || | ||| |||| ||||| ||||||||||| || || Sbjct 1242249 ATGTAGGTATCGATCAGCAATGAGTAGGTTTCTGAGTGGATGTTCTCCATCATAATTTGG 1242308 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353 || ||||| ||||| ||||| || | || ||||| || || ||| || || | ||| Sbjct 1242309 AAGCCGTAGAAGCAGCGGGCCTCGGGGATCTGAACCTCGCCGCTGAAGCGCTCGACCAGA 1242368 Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATAT 17413 || ||||| ||||| || || || ||||| || |||| ||||| |||||||||| Sbjct 1242369 TTCTCGTTGACGATACCATCTGAGGCAGCGAAGAAAGCCAGGATATGAGAAATGAAATAT 1242428 Query 17414 TTTTCGTCCGGTGTAAGA---ACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCT 17470 |||||||| | ||| | |||||| | | ||||||||| | ||| | || Sbjct 1242429 TTTTCGTCGTCATTCAGACGGTTGTTCCAGTCGTGCAGATCTTTGGAGAGATCAATCTCC 1242488 Query 17471 TCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAATATCATTGTAT 17527 |||| ||||| ||| ||| | || || || ||||| | ||| || | ||||||| Sbjct 1242489 TCGGCCGTCCAGAAAGAAGCTTCAGCTTTCTTGTACATTTGCCAGATCTAATTGTAT 1242545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517543225759560