Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metarhizium_20robertsii_20[genbank_20GCA_5F000591435.1_202014-03-17]
367 sequences; 40,317,276 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq1 127 2e-24
seq10 98.7 9e-16
>seq1
Length=5053378
Score = 127 bits (140), Expect = 2e-24
Identities = 156/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585
|| ||||||||| | || ||| || || |||||||| ||||||| ||||| |||
Sbjct 3941193 CAGCACCAAGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATC 3941252
Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
||||||||| || |||||| ||||||| ||||| || ||||| || ||||||||||||||
Sbjct 3941253 CTCGAGCTGCTTACCAGCGAAGATGAGTCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTC 3941312
Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705
|| || || || | |||| |||||| | ||| ||||| | ||| | ||
Sbjct 3941313 CTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGT 3941372
Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || || || || || || |||||||||||
Sbjct 3941373 CTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 3941405
Score = 116 bits (128), Expect = 3e-21
Identities = 163/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || || | || || || | ||||| |||||||| || ||||||||||||||
Sbjct 1684577 TACCACCACGAAGTCGCAGGACAAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAATCAG 1684518
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
|| || || ||||||||||| || ||||| |||| |||||||| |||||||| |
Sbjct 1684517 ACAGCGTTCGGCCGTCCTCGAGCTGCTTACCAGCAAAGATAAGACGCTGTTGATCGGGGG 1684458
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| ||||| || || || ||| ||| ||| || | || | ||||||| | |||||
Sbjct 1684457 GAATGCCTTCTTTATCCTGAATCTTTGATTTGACATTGTCAATCGTGTCCGAGGACTCGA 1684398
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
| || | || | || || || |||| ||| || || || || |||||
Sbjct 1684397 CTTCTAACGTGATTGTCTTTCCAGTCAAAGTCTTGACGAAGATTTGCAT 1684349
Score = 102 bits (112), Expect = 7e-17
Identities = 143/201 (71%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| || || || || ||||||||||| | || || |||||| ||||| || |||
Sbjct 1684016 GTGGATTCCTTCTGGATGTTGTAATCCGAGAGGGTACGGCCATCCTCAAGCTGCTTGCCA 1683957
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
||| | || | ||||| || || || || || ||||||||||| ||| || |||
Sbjct 1683956 GCGAAAATTAAGCGCTGTTGGTCAGGCGGGATACCCTCCTTGTCCTGAATCTTCGACTTA 1683897
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | |||| |||||| | ||||||||| | || | || ||||| || ||||||
Sbjct 1683896 ACATTGTCGATGGTGTCGGACGACTCGACCTCAAGAGTGATGGTCTTGCCCGTGAGAGTT 1683837
Query 118722 TTTACAAAAATCTGCATGGCT 118742
|| ||||| || |||||||||
Sbjct 1683836 TTGACAAAGATTTGCATGGCT 1683816
Score = 91.5 bits (100), Expect = 1e-13
Identities = 131/185 (71%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| ||||| || || || ||| || ||||| ||| || |||||||| |||
Sbjct 1684317 GTGGACTCCTTTTGGATATTATAGTCGGACAGTGTGCGGCCATCTTCAAGCTGTTTGCCA 1684258
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
||| | || || ||||| || |||||||| || ||||||||||| || || ||
Sbjct 1684257 GCGAAAATCAGGCGCTGTTGGTCGGGAGGAATACCCTCCTTGTCCTGGATCTTCGACTTG 1684198
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | |||| |||||| | ||| ||||||| ||| | || || ||||| || ||
Sbjct 1684197 ACGTTGTCGATGGTGTCGGATGACTCCACCTCGAGGGTGATGGTCTTTCCGGTGAGGGTC 1684138
Query 118722 TTTAC 118726
|| ||
Sbjct 1684137 TTGAC 1684133
>seq10
Length=656475
Score = 98.7 bits (108), Expect = 9e-16
Identities = 138/193 (72%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610
|| || |||||||| ||| || ||| || ||||||||||||||| ||||| ||||
Sbjct 567917 TTCTGGATGTTGTAGTCGGACAAAGTTCGGCCATCCTCGAGCTGTTTGCCAGCAAAGATC 567976
Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670
| |||||||| || || || || ||||||||||| || || || || | |||
Sbjct 567977 AATCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 568036
Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 118730
| || || | | ||||||||| | ||| | || ||||| ||||| || || ||||||
Sbjct 568037 ATCGTATCGGAGGACTCGACCTCAAGGGTAATGGTCTTGCCCGTCAGGGTCTTCACAAAA 568096
Query 118731 ATCTGCATGGCTT 118743
|||| | ||||
Sbjct 568097 --CTGCGTTGCTT 568107
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433828459557964
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |