Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metarhizium_20robertsii_20[genbank_20GCA_5F000591435.1_202014-03-17]
367 sequences; 40,317,276 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq1 123 2e-23
seq10 93.3 3e-14
>seq1
Length=5053378
Score = 123 bits (136), Expect = 2e-23
Identities = 147/197 (75%), Gaps = 2/197 (1%)
Strand=Plus/Minus
Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257
||| ||||| |||||||| || || || |||| | || || | ||||||||| |||||
Sbjct 1684011 TTCCTTCTGGATGTTGTAATCCGAGAGGGTACGGCCATCCTCAAGCTGCTTGCCAGCGAA 1683952
Query 34258 AATGAGCCGCTGCTGGTC-GACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGAT 34316
||| | ||||| ||||| | |||| | | ||||||||| ||||| ||| | ||
Sbjct 1683951 AATTAAGCGCTGTTGGTCAGGCGGG-ATACCCTCCTTGTCCTGAATCTTCGACTTAACAT 1683893
Query 34317 CGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCA 34376
| | || | |||| ||| ||||| || | |||||||| ||||| ||||||||||| |
Sbjct 1683892 TGTCGATGGTGTCGGACGACTCGACCTCAAGAGTGATGGTCTTGCCCGTGAGAGTTTTGA 1683833
Query 34377 CAAAGATCTGCATCGCT 34393
||||||| ||||| |||
Sbjct 1683832 CAAAGATTTGCATGGCT 1683816
Score = 114 bits (126), Expect = 8e-21
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || ||||| | |||||||| ||| | || || || ||||| |||||||||||| |
Sbjct 3941179 CCACCACGCAGGCGCAGCACCAAGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 3941238
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| ||| | || || | |||||| || ||||| ||||| ||||| |||||| |||
Sbjct 3941239 AGGGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAGATGAGTCGCTGTTGGTCGGGGGGG 3941298
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || ||||||||| ||||| ||| | | | | || | |||| || || ||
Sbjct 3941299 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 3941358
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
|| | ||||| || || || ||||| || || || || |||||||||
Sbjct 3941359 TCAAGGGTGATAGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATC 3941406
Score = 82.4 bits (90), Expect = 5e-11
Identities = 147/215 (68%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || || || | ||| || || |||| ||| || || || || || |||||||||
Sbjct 1684347 CCACCACGAAGTCGCAGGACAAGATGTAGAGTGGACTCCTTTTGGATATTATAGTCGGAC 1684288
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| ||| | || || | ||| ||||| |||||||| || ||||| |||||| ||
Sbjct 1684287 AGTGTGCGGCCATCTTCAAGCTGTTTGCCAGCGAAAATCAGGCGCTGTTGGTCGGGAGGA 1684228
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | ||||||||| ||||| ||| | | | | || | |||| || || ||
Sbjct 1684227 ATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCGGATGACTCCACC 1684168
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377
|| | |||||||| || |||||||| || || ||
Sbjct 1684167 TCGAGGGTGATGGTCTTTCCGGTGAGGGTCTTGAC 1684133
>seq10
Length=656475
Score = 93.3 bits (102), Expect = 3e-14
Identities = 128/179 (72%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 34202 TTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATG 34261
||||| |||||||||||||||| ||| | || || | ||| ||||| || || ||
Sbjct 567917 TTCTGGATGTTGTAGTCGGACAAAGTTCGGCCATCCTCGAGCTGTTTGCCAGCAAAGATC 567976
Query 34262 AGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCT 34321
| ||||||||||| ||| | | ||||||||| ||||| ||| | || | |
Sbjct 567977 AATCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 568036
Query 34322 ATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAA 34380
|||| ||||| || ||||| || | || ||||| ||||| || || || ||||||||
Sbjct 568037 ATCGTATCGGAGGACTCGACCTCAAGGGTAATGGTCTTGCCCGTCAGGGTCTTCACAAA 568095
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323070554959520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |