Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metarhizium_20robertsii_20[genbank_20GCA_5F000591435.1_202014-03-17]
367 sequences; 40,317,276 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq1 138 9e-28
>seq1
Length=5053378
Score = 138 bits (152), Expect = 9e-28
Identities = 160/216 (74%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
||||||||||| |||||||||||||| |||||||||||| |||| ||| | || ||
Sbjct 3941197 ACCAAGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCG 3941256
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || || ||||| || | |||||||||||||| || | ||||||||||||
Sbjct 3941257 AGCTGCTTACCAGCGAAGATGAGTCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGG 3941316
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | |||| | ||||||||| | ||| || |||||
Sbjct 3941317 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTC 3941376
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTTGCCT 45343
||||| || ||||| || || || ||||| ||||||
Sbjct 3941377 CCCGTGAGGGTCTTGACGAAAATCTGCATCTTGCCT 3941412
Score = 105 bits (116), Expect = 5e-18
Identities = 145/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193
||||| |||||||||||||| || || |||||| | || |||| |||| ||||| ||
Sbjct 1684779 TGCAGGGTGCTCTCCTTCTGGATATTATAGTCGCTGAGGGTGCGACCGTCTTCCAGCTGC 1684720
Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTT 45253
|| || || || || | ||||||||||| || || | || |||||||| ||| |||
Sbjct 1684719 TTGCCAGCAAAGATAAGACGCTGTTGGTCAGGGGGAATGCCTTCCTTGTCTTGAATCTTT 1684660
Query 45254 TGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTC 45313
||| || | | | || | ||||| |||| || || |||||||| |||
Sbjct 1684659 GACTTGACATTGTCAATAGTATCGCTGGATTCCACTTCCAATGTGATAGTCTTGCCAGTC 1684600
Query 45314 AGAGTCTTCACAAAGATTTGCAT 45336
| |||||| || |||||||||||
Sbjct 1684599 AAAGTCTTGACGAAGATTTGCAT 1684577
Score = 100 bits (110), Expect = 2e-16
Identities = 145/205 (71%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192
||| || ||| |||||||| |||||||| || || || | || || || ||
Sbjct 1684023 GTGAAGGGTGGATTCCTTCTGGATGTTGTAATCCGAGAGGGTACGGCCATCCTCAAGCTG 1683964
Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252
|| || ||||| || || ||||||||||| || || | ||||||||||||| ||| ||
Sbjct 1683963 CTTGCCAGCGAAAATTAAGCGCTGTTGGTCAGGCGGGATACCCTCCTTGTCCTGAATCTT 1683904
Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312
|||||| | | | |||| ||| ||||| | || || |||||||||||
Sbjct 1683903 CGACTTAACATTGTCGATGGTGTCGGACGACTCGACCTCAAGAGTGATGGTCTTGCCCGT 1683844
Query 45313 CAGAGTCTTCACAAAGATTTGCATG 45337
||||| || |||||||||||||||
Sbjct 1683843 GAGAGTTTTGACAAAGATTTGCATG 1683819
Score = 93.3 bits (102), Expect = 3e-14
Identities = 139/196 (71%), Gaps = 1/196 (1%)
Strand=Plus/Minus
Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188
|||| || || ||| |||||| || || || |||||| |||| ||| | || || |
Sbjct 1684328 CAAGATGTAGAGTGGACTCCTTTTGGATATTATAGTCGGACAGTGTGCGGCCATCTTCAA 1684269
Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248
| ||||| || ||||| |||| ||||||||||||||||| | ||||||||||||| |
Sbjct 1684268 GCTGTTTGCCAGCGAAAATCAGGCGCTGTTGGTCGGGAGGAATACCCTCCTTGTCCTGGA 1684209
Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308
| || ||| || | | | |||| ||||||||| | ||| || ||||| |
Sbjct 1684208 TCTTCGACTTGACGTTGTCGATGGTGTCGGATGACTCCACCTCGAGGGTGATGGTCTTTC 1684149
Query 45309 CCGTCAGAGTCTTCAC 45324
| || || ||||| ||
Sbjct 1684148 CGGTGAGGGTCTTGAC 1684133
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395073432902707
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |