Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metarhizium_20robertsii_20[genbank_20GCA_5F000591435.1_202014-03-17] 367 sequences; 40,317,276 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq1 138 9e-28 >seq1 Length=5053378 Score = 138 bits (152), Expect = 9e-28 Identities = 160/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||||||||| |||||||||||||| |||||||||||| |||| ||| | || || Sbjct 3941197 ACCAAGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCG 3941256 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || ||||| || | |||||||||||||| || | |||||||||||| Sbjct 3941257 AGCTGCTTACCAGCGAAGATGAGTCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGG 3941316 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | |||| | ||||||||| | ||| || ||||| Sbjct 3941317 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTC 3941376 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTTGCCT 45343 ||||| || ||||| || || || ||||| |||||| Sbjct 3941377 CCCGTGAGGGTCTTGACGAAAATCTGCATCTTGCCT 3941412 Score = 105 bits (116), Expect = 5e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193 ||||| |||||||||||||| || || |||||| | || |||| |||| ||||| || Sbjct 1684779 TGCAGGGTGCTCTCCTTCTGGATATTATAGTCGCTGAGGGTGCGACCGTCTTCCAGCTGC 1684720 Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTT 45253 || || || || || | ||||||||||| || || | || |||||||| ||| ||| Sbjct 1684719 TTGCCAGCAAAGATAAGACGCTGTTGGTCAGGGGGAATGCCTTCCTTGTCTTGAATCTTT 1684660 Query 45254 TGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTC 45313 ||| || | | | || | ||||| |||| || || |||||||| ||| Sbjct 1684659 GACTTGACATTGTCAATAGTATCGCTGGATTCCACTTCCAATGTGATAGTCTTGCCAGTC 1684600 Query 45314 AGAGTCTTCACAAAGATTTGCAT 45336 | |||||| || ||||||||||| Sbjct 1684599 AAAGTCTTGACGAAGATTTGCAT 1684577 Score = 100 bits (110), Expect = 2e-16 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || ||| |||||||| |||||||| || || || | || || || || Sbjct 1684023 GTGAAGGGTGGATTCCTTCTGGATGTTGTAATCCGAGAGGGTACGGCCATCCTCAAGCTG 1683964 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || || ||||| || || ||||||||||| || || | ||||||||||||| ||| || Sbjct 1683963 CTTGCCAGCGAAAATTAAGCGCTGTTGGTCAGGCGGGATACCCTCCTTGTCCTGAATCTT 1683904 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 |||||| | | | |||| ||| ||||| | || || ||||||||||| Sbjct 1683903 CGACTTAACATTGTCGATGGTGTCGGACGACTCGACCTCAAGAGTGATGGTCTTGCCCGT 1683844 Query 45313 CAGAGTCTTCACAAAGATTTGCATG 45337 ||||| || ||||||||||||||| Sbjct 1683843 GAGAGTTTTGACAAAGATTTGCATG 1683819 Score = 93.3 bits (102), Expect = 3e-14 Identities = 139/196 (71%), Gaps = 1/196 (1%) Strand=Plus/Minus Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188 |||| || || ||| |||||| || || || |||||| |||| ||| | || || | Sbjct 1684328 CAAGATGTAGAGTGGACTCCTTTTGGATATTATAGTCGGACAGTGTGCGGCCATCTTCAA 1684269 Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248 | ||||| || ||||| |||| ||||||||||||||||| | ||||||||||||| | Sbjct 1684268 GCTGTTTGCCAGCGAAAATCAGGCGCTGTTGGTCGGGAGGAATACCCTCCTTGTCCTGGA 1684209 Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308 | || ||| || | | | |||| ||||||||| | ||| || ||||| | Sbjct 1684208 TCTTCGACTTGACGTTGTCGATGGTGTCGGATGACTCCACCTCGAGGGTGATGGTCTTTC 1684149 Query 45309 CCGTCAGAGTCTTCAC 45324 | || || ||||| || Sbjct 1684148 CGGTGAGGGTCTTGAC 1684133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395073432902707