Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metarhizium_20robertsii_20[genbank_20GCA_5F000591435.1_202014-03-17]
367 sequences; 40,317,276 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq3 129 1e-24
seq30 111 3e-19
>seq3
Length=2231953
Score = 129 bits (142), Expect = 1e-24
Identities = 297/445 (67%), Gaps = 17/445 (4%)
Strand=Plus/Minus
Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977
|| || || ||||| ||||| || |||||||| |||||||||||||| || || ||||||
Sbjct 1242075 GTCGCGTTCGCTGCTGTTGAGGGCATCTTCTTCAGTGGTGCATTCGCCTCTATCTTCTGG 1242016
Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037
| ||||| | || | |||| ||||| |||| |||||| ||| |||| ||| | ||
Sbjct 1242015 CTGAAGAAGCGCGGCCTCATGCCAGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTGAT 1241956
Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTG--TTGAAA----AAGGGTTTTGTTGAT 102091
|| ||||| || |||||||| ||| | ||| || | ||| |
Sbjct 1241955 GAGGGTCTGCACACTGACTTTGCCTGCCTCCTGCATTCCCACCTCAAGAAT--------C 1241904
Query 102092 ACCCCATCAAGAGAAAGGATTCT-TGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGA 102150
| | | || || ||| ||| || || | || || || ||| ||||| |||||
Sbjct 1241903 GCGCTAGCA--AGCAAGTCATCTACGACATCATTACAGACGCTGTCGCTATTGAGCAAGA 1241846
Query 102151 ATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCA 102210
|||| | || | | ||||| || | || ||||||| ||| ||||||| ||
Sbjct 1241845 ATTTTTGACTGAGGCTCTGCCCTGCGCTCTACTTGGCATGAACTCCAATTTGATGAAGCA 1241786
Query 102211 GTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAA 102270
|||||||||||| || || ||| | ||||| | | ||| || ||| || ||
Sbjct 1241785 GTACATTGAATTCGTTGCTGATCGTTTGTTGGTCGCTCTTGGAAACGAGAAGGTGTACAA 1241726
Query 102271 TGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTT 102330
|||| |||||| |||||||| || ||||| || | ||||||||||| ||
Sbjct 1241725 AACGTCCAATCCCTTCGACTTCATGGAAAACATTTCTCTTGGCGGCAAGACCAACTTCTT 1241666
Query 102331 TGAAAAGAGAGTCGCCGAGTATCAA 102355
||||||| |||| | || || |||
Sbjct 1241665 TGAAAAGCGAGTTGGTGACTACCAA 1241641
>seq30
Length=309456
Score = 111 bits (122), Expect = 3e-19
Identities = 181/258 (70%), Gaps = 2/258 (1%)
Strand=Plus/Minus
Query 94786 CCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCC 94845
|||| || || || ||||||| || || || ||| ||||| || || || ||
Sbjct 47334 CCGATGCCACCGGCCATCTTGGAAATCATGGCACAAGTCTTGAGAGTGTCGTAGATGCCG 47275
Query 94846 TCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACT-GT 94904
|| || || ||||| | | | ||| |||||||||||| ||||| |||| | ||| ||
Sbjct 47274 TCGATACTGTCATCCTTCATGTCCACAAGGAAGCACGAAGAAAGCTGGGCT-TGAGGAGT 47216
Query 94905 TCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATA 94964
||| ||| || ||||| || || |||||||| || | | || |||||||| | ||
Sbjct 47215 ACCAGCATTGAAGAGTGTAGGTGAGGCATGGGTGAAGAATTTGCTTGACATGAGGTTGTA 47156
Query 94965 TGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCAT 95024
||||||||||| | |||| ||| || |||||||| ||||||||||||||
Sbjct 47155 GGTTTCAATGACGCGCTCAATGTTGTCTCCCCAGATACCGACAGCAACACGCATAATCAT 47096
Query 95025 GTCCTGAGGGCGCTCAAC 95042
| ||||| || |||||
Sbjct 47095 ATGTTGAGGTCGTTCAAC 47078
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989579346790485
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |