Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metarhizium_20robertsii_20[genbank_20GCA_5F000591435.1_202014-03-17]
367 sequences; 40,317,276 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq1 118 1e-21
>seq1
Length=5053378
Score = 118 bits (130), Expect = 1e-21
Identities = 158/217 (73%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 139550 CGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAG 139609
|||| || | ||| | |||||||| || |||||||| ||||| || || | |
Sbjct 1684563 CGCAGGACAAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCGGCCG 1684504
Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669
|| |||||||| ||||||||| |||| ||||| || |||||||| || |||||||||||
Sbjct 1684503 TCCTCGAGCTGCTTACCAGCAAAGATAAGACGCTGTTGATCGGGGGGAATGCCTTCTTTA 1684444
Query 139670 TCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCAC 139728
|| ||| | |||| ||| | | || | ||||| | || ||| || || | || |
Sbjct 1684443 TC-CTGAATCTTTGATTTGACATTGTCAATCGTGTCCGAGGACTCGACTTCTAACGTGAT 1684385
Query 139729 CGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
||||| || ||||| || || ||||| |||||||||
Sbjct 1684384 TGTCTTTCCAGTCAAAGTCTTGACGAAGATTTGCATA 1684348
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 139550 CGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAG 139609
|||| || ||||| | || ||| || || ||||| || ||||||| ||||
Sbjct 3941191 CGCAGCACCAAGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA 3941250
Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669
|| |||||||| |||||||| |||| || || || || ||||| || ||||| || |||
Sbjct 3941251 TCCTCGAGCTGCTTACCAGCGAAGATGAGTCGCTGTTGGTCGGGGGGGATGCCCTCCTTG 3941310
Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729
|| ||| || || | | || | ||||||| | ||||||||||| ||| |
Sbjct 3941311 TCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATA 3941370
Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
||||| || || | || || ||||| || |||||
Sbjct 3941371 GTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 3941405
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496061724306400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |