Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metarhizium_20robertsii_20[genbank_20GCA_5F000591435.1_202014-03-17] 367 sequences; 40,317,276 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq3 147 3e-30 seq30 141 1e-28 >seq3 Length=2231953 Score = 147 bits (162), Expect = 3e-30 Identities = 391/604 (65%), Gaps = 49/604 (8%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||| || ||| | || || || ||||||| ||| ||| | ||||| Sbjct 1242535 ATCTGGCAAATGTACAAGAAAGCTGAAGCTTCTTTCTGGACGGCCGAGGAGATTGATCTC 1242476 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 ||||| || ||| |||| ||| | | ||| ||| ||| || | | || || || Sbjct 1242475 TCCAAAGATCTGCACGACTGGAACAACCGTCTGAATGACGACGAAAAATATTTCATTTCT 1242416 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198 || || |||| ||||| || | ||| ||||| ||||||||||| |||||| | || Sbjct 1242415 CATATCCTGGCTTTCTTCGCTGCCTCAGATGGTATCGTCAACGAGAATCTGGTCGAGCGC 1242356 Query 125199 TTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATT 125258 ||| ||| | || || |||| ||||| ||||| |||||||| ||||| Sbjct 1242355 TTCAGCGGCGAGGTTCAGATCCCCGAGGCCCGCTGCTTCTACGGCTTCCAAATTATGATG 1242296 Query 125259 GAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGA---TCCG 125315 |||||| | ||||| |||| ||||| ||||| || | ||||| || | | Sbjct 1242295 GAGAACATCCACTCAGAAACCTACTCATTGCTGATCGATACCTACATCAAAGAGAATGCC 1242236 Query 125316 CAACGTAAACAC-------ATGCTCTTTA-------------ACGCA-------AT---C 125345 ||||| | || ||||| || | |||| || | Sbjct 1242235 CAACGCACCTACTTATTCAATGCTATTGATACCAGTATGTTCACGCGCGCTACTATTTCC 1242176 Query 125346 GACACGGTGC----------------CGTCTATACGTAAAAAGGCTCAATGGGTGATTCG 125389 ||| || ||| | | ||| || || ||||| | |||| || || Sbjct 1242175 GACCCGCTGCTAATTCAAGCTAGTTCCTTGTATCCGCAAGAAGGCCGACTGGGCCATCCG 1242116 Query 125390 GTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGA 125449 |||||| | ||| | ||||| | | ||| | | || || || ||||| || || || Sbjct 1242115 ATGGATCCAGGACAAGGAGTCTACCTTCGCTCAGCGTCTCGTCGCGTTCGCTGCTGTTGA 1242056 Query 125450 GGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCAT 125509 |||||||||||| ||| || || | ||||| ||||| ||||||||||| ||||| Sbjct 1242055 GGGCATCTTCTTCAGTGGTGCATTCGCCTCTATCTTCTGGCTGAAGAAGCGCGGCCTCAT 1241996 Query 125510 GCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTT 125569 ||| || ||||| | |||||| | || ||||| || ||||| || ||| |||||| Sbjct 1241995 GCCAGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTGATGAGGGTCTGCACACTGACTT 1241936 Query 125570 TGCC 125573 |||| Sbjct 1241935 TGCC 1241932 >seq30 Length=309456 Score = 141 bits (156), Expect = 1e-28 Identities = 362/543 (67%), Gaps = 6/543 (1%) Strand=Plus/Plus Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATG-CAATGTCACG 96865 || ||||||| | ||| ||| | | || |||||| | ||| ||| || || || | Sbjct 47381 ACCAACGGCACCTCCAACGGCATCATTCCCATGCTCCGTGTGTTCAACAACACTGCCA-G 47439 Query 96866 ATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTG 96925 ||| ||| ||||| ||||| || || || || || | || ||||| |||| ||||| Sbjct 47440 ATATGTTGACCAGGGTGGCAACAAGCGTCCCGGTGCCTTTGCAATCTACCTGGAGCCTTG 47499 Query 96926 GCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACG 96985 |||||| || ||||| || || |||| | | |||||| ||| || || | || Sbjct 47500 GCACGCTGATGTTTTCGAGTTCCTCGATCTCAGAAAAAACCACGGCAAGGAGGAAGTCCG 47559 Query 96986 AGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGA 97045 || | || | || ||| |||||| | || || | ||||||||||| ||| | | Sbjct 47560 TGCTCGTGATCTTTTCCTTGCCCTCTGGATTCCCGACCTCTTCATGAAGCGTGTCGAGAA 47619 Query 97046 CGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGG 97105 ||| |||||| || ||||| ||| || | || || || |||| |||| || Sbjct 47620 GAACGGCGACTGGACTCTGATGTGTCCCAACGAATGCCCTGGCCTTGCCGACTGCTATGG 47679 Query 97106 CGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCC-GATACGTGAGACGAG 97164 || ||||| ||||| |||| ||||||| ||||||| | ||| ||| | Sbjct 47680 TGAGGAGTTCGAGGCTCTGTACGAAAAGTACGAGCGAGAGGGCAAGGGCCGTAGGACCAT 47739 Query 97165 TCGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCG 97223 ||| || | |||| || ||| | ||||| | ||||||| |||||||| | ||| Sbjct 47740 TCGG-GCTC-AGAAGCTCTGGTACTCCATCCTTGAGGCTCAGACCGAGACTGGTAATCCC 47797 Query 97224 TACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATC 97283 | ||| |||||||||||| || || || |||||||| || | || |||||| Sbjct 47798 TTCATGCTCTACAAGGATGCCTGCAACAAGAAGAGCAACCAGAAGAACCTCGGTACCATC 47857 Query 97284 AAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTT 97343 |||| || || ||||| || ||||| || ||| | | || |||||| ||| || Sbjct 47858 CGCAGCTCTAACCTTTGCACTGAGATTGTTGAATACTCTGCCCCTGACGAGGTGGCTGTC 47917 Query 97344 TGC 97346 ||| Sbjct 47918 TGC 47920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741055800390920