Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metarhizium_20robertsii_20[genbank_20GCA_5F000591435.1_202014-03-17]
367 sequences; 40,317,276 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq1 134 3e-26
>seq1
Length=5053378
Score = 134 bits (148), Expect = 3e-26
Identities = 150/198 (76%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
||||| || |||||||| || || ||||| || |||| ||||| || || || || |||
Sbjct 1684545 GTAGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCGGCCGTCCTCGAGCTGCTTACCA 1684486
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || || | ||||||||| || || || |||||||||||||||||||||| |||
Sbjct 1684485 GCAAAGATAAGACGCTGTTGATCGGGGGGAATGCCTTCTTTATCCTGAATCTTTGATTTG 1684426
Query 104483 ACATTTTCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541
||||| || | || || | ||| || || |||| || || ||||| ||||| | ||
Sbjct 1684425 ACATTGTCAATCGTGTC-CGAGGACTCGACTTCTAACGTGATTGTCTTTCCAGTCAAAGT 1684367
Query 104542 TTTTACAAATATCTGCAT 104559
|| || || || |||||
Sbjct 1684366 CTTGACGAAGATTTGCAT 1684349
Score = 132 bits (146), Expect = 1e-25
Identities = 144/191 (75%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428
|| ||||| ||||||||||| || || | ||||||||| || || || ||||||||
Sbjct 1684767 TCCTTCTGGATATTATAGTCGCTGAGGGTGCGACCGTCTTCCAGCTGCTTGCCAGCAAAG 1684708
Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488
|| || | |||||| ||||| || || ||||| || || |||||||||| || |||||
Sbjct 1684707 ATAAGACGCTGTTGGTCAGGGGGAATGCCTTCCTTGTCTTGAATCTTTGACTTGACATTG 1684648
Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548
|| | |||||||| | ||| || || | ||| |||||||| ||||| | || || ||
Sbjct 1684647 TCAATAGTATCGCTGGATTCCACTTCCAATGTGATAGTCTTGCCAGTCAAAGTCTTGACG 1684588
Query 104549 AATATCTGCAT 104559
|| || |||||
Sbjct 1684587 AAGATTTGCAT 1684577
Score = 113 bits (124), Expect = 1e-19
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| ||||| ||||| || || || || || || || | || || || || || || |||
Sbjct 1684016 GTGGATTCCTTCTGGATGTTGTAATCCGAGAGGGTACGGCCATCCTCAAGCTGCTTGCCA 1683957
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| ||||||| | |||||| ||||| || || || || || ||||||||||| | ||
Sbjct 1683956 GCGAAAATTAAGCGCTGTTGGTCAGGCGGGATACCCTCCTTGTCCTGAATCTTCGACTTA 1683897
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | ||| ||| | || ||||| || || || ||||| || || || |||
Sbjct 1683896 ACATTGTCGATGGTGTCGGACGACTCGACCTCAAGAGTGATGGTCTTGCCCGTGAGAGTT 1683837
Query 104543 TTTACAAATATCTGCAT 104559
|| ||||| || |||||
Sbjct 1683836 TTGACAAAGATTTGCAT 1683820
Score = 109 bits (120), Expect = 1e-18
Identities = 144/200 (72%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407
|| || ||||||| || || || || || ||||||||||| || || || | || |||
Sbjct 1684332 AGGACAAGATGTAGAGTGGACTCCTTTTGGATATTATAGTCGGACAGTGTGCGGCCATCT 1684273
Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467
|| || ||||| ||||| ||||| || | |||||| || ||||| || || || || |||
Sbjct 1684272 TCAAGCTGTTTGCCAGCGAAAATCAGGCGCTGTTGGTCGGGAGGAATACCCTCCTTGTCC 1684213
Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527
|| ||||| | || || || || | ||| ||| | || ||||| || || || |||
Sbjct 1684212 TGGATCTTCGACTTGACGTTGTCGATGGTGTCGGATGACTCCACCTCGAGGGTGATGGTC 1684153
Query 104528 TTACCAGTAAGTGTTTTTAC 104547
|| || || || || || ||
Sbjct 1684152 TTTCCGGTGAGGGTCTTGAC 1684133
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151392985908836
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |