Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metarhizium_20robertsii_20[genbank_20GCA_5F000591435.1_202014-03-17] 367 sequences; 40,317,276 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq1 134 3e-26 >seq1 Length=5053378 Score = 134 bits (148), Expect = 3e-26 Identities = 150/198 (76%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 ||||| || |||||||| || || ||||| || |||| ||||| || || || || ||| Sbjct 1684545 GTAGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCGGCCGTCCTCGAGCTGCTTACCA 1684486 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || | ||||||||| || || || |||||||||||||||||||||| ||| Sbjct 1684485 GCAAAGATAAGACGCTGTTGATCGGGGGGAATGCCTTCTTTATCCTGAATCTTTGATTTG 1684426 Query 104483 ACATTTTCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | || || | ||| || || |||| || || ||||| ||||| | || Sbjct 1684425 ACATTGTCAATCGTGTC-CGAGGACTCGACTTCTAACGTGATTGTCTTTCCAGTCAAAGT 1684367 Query 104542 TTTTACAAATATCTGCAT 104559 || || || || ||||| Sbjct 1684366 CTTGACGAAGATTTGCAT 1684349 Score = 132 bits (146), Expect = 1e-25 Identities = 144/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || ||||| ||||||||||| || || | ||||||||| || || || |||||||| Sbjct 1684767 TCCTTCTGGATATTATAGTCGCTGAGGGTGCGACCGTCTTCCAGCTGCTTGCCAGCAAAG 1684708 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || || | |||||| ||||| || || ||||| || || |||||||||| || ||||| Sbjct 1684707 ATAAGACGCTGTTGGTCAGGGGGAATGCCTTCCTTGTCTTGAATCTTTGACTTGACATTG 1684648 Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548 || | |||||||| | ||| || || | ||| |||||||| ||||| | || || || Sbjct 1684647 TCAATAGTATCGCTGGATTCCACTTCCAATGTGATAGTCTTGCCAGTCAAAGTCTTGACG 1684588 Query 104549 AATATCTGCAT 104559 || || ||||| Sbjct 1684587 AAGATTTGCAT 1684577 Score = 113 bits (124), Expect = 1e-19 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || ||||| ||||| || || || || || || || | || || || || || || ||| Sbjct 1684016 GTGGATTCCTTCTGGATGTTGTAATCCGAGAGGGTACGGCCATCCTCAAGCTGCTTGCCA 1683957 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || ||||||| | |||||| ||||| || || || || || ||||||||||| | || Sbjct 1683956 GCGAAAATTAAGCGCTGTTGGTCAGGCGGGATACCCTCCTTGTCCTGAATCTTCGACTTA 1683897 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | ||| ||| | || ||||| || || || ||||| || || || ||| Sbjct 1683896 ACATTGTCGATGGTGTCGGACGACTCGACCTCAAGAGTGATGGTCTTGCCCGTGAGAGTT 1683837 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| || ||||| Sbjct 1683836 TTGACAAAGATTTGCAT 1683820 Score = 109 bits (120), Expect = 1e-18 Identities = 144/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||||| || || || || || ||||||||||| || || || | || ||| Sbjct 1684332 AGGACAAGATGTAGAGTGGACTCCTTTTGGATATTATAGTCGGACAGTGTGCGGCCATCT 1684273 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || || ||||| ||||| ||||| || | |||||| || ||||| || || || || ||| Sbjct 1684272 TCAAGCTGTTTGCCAGCGAAAATCAGGCGCTGTTGGTCGGGAGGAATACCCTCCTTGTCC 1684213 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 || ||||| | || || || || | ||| ||| | || ||||| || || || ||| Sbjct 1684212 TGGATCTTCGACTTGACGTTGTCGATGGTGTCGGATGACTCCACCTCGAGGGTGATGGTC 1684153 Query 104528 TTACCAGTAAGTGTTTTTAC 104547 || || || || || || || Sbjct 1684152 TTTCCGGTGAGGGTCTTGAC 1684133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151392985908836