Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metarhizium_20robertsii_20[genbank_20GCA_5F000591435.1_202014-03-17]
367 sequences; 40,317,276 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq1 96.9 3e-15
>seq1
Length=5053378
Score = 96.9 bits (106), Expect = 3e-15
Identities = 143/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583
||||| ||| ||||| || ||||||||||| | | || | ||||| ||||||
Sbjct 1684022 TGAAGGGTGGATTCCTTCTGGATGTTGTAATCCGAGAGGGTACGGCCATCCTCAAGCTGC 1683963
Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643
|| || || ||||||| ||||| || || ||| | || ||||||||| ||| |||
Sbjct 1683962 TTGCCAGCGAAAATTAAGCGCTGTTGGTCAGGCGGGATACCCTCCTTGTCCTGAATCTTC 1683903
Query 48644 TGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTG 48703
||| | | | ||||| |||| ||||| ||| | || ||||| || || |||
Sbjct 1683902 GACTTAACATTGTCGATGGTGTCGGACGACTCGACCTCAAGAGTGATGGTCTTGCCCGTG 1683843
Query 48704 AGAGTTTTCACAAAAATCTGCAT 48726
|||||||| ||||| || |||||
Sbjct 1683842 AGAGTTTTGACAAAGATTTGCAT 1683820
Score = 87.8 bits (96), Expect = 2e-12
Identities = 165/238 (69%), Gaps = 6/238 (3%)
Strand=Plus/Plus
Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558
||| || |||| | | ||| || || || ||||||||||| || |||||||| || ||
Sbjct 3941178 ACCACCACGCAGGCGCAGCACCAAGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTC-GC 3941236
Query 48559 CAATTGT-CGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCG 48617
| || || | ||||| ||||||||||| || | || | ||||| || || |
Sbjct 3941237 TCAGGGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAGATGAGTCGCTGTTGGTCGGGGG 3941296
Query 48618 GCACACTTTCCTTGTCCATAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTC 48675
| | | ||||||||| || || ||||| | | || ||||| |||| ||||||
Sbjct 3941297 GGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCG--ATGGTGTCGGAAGACTC 3941354
Query 48676 CGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATCGTGTCT 48733
| ||| | || || || || || ||||| || || || |||||||||||| || ||
Sbjct 3941355 CACCTCAAGGGTGATAGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTTGCCT 3941412
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421249315822367
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |