Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metarhizium_20robertsii_20[genbank_20GCA_5F000591435.1_202014-03-17] 367 sequences; 40,317,276 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq1 96.9 3e-15 >seq1 Length=5053378 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583 ||||| ||| ||||| || ||||||||||| | | || | ||||| |||||| Sbjct 1684022 TGAAGGGTGGATTCCTTCTGGATGTTGTAATCCGAGAGGGTACGGCCATCCTCAAGCTGC 1683963 Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643 || || || ||||||| ||||| || || ||| | || ||||||||| ||| ||| Sbjct 1683962 TTGCCAGCGAAAATTAAGCGCTGTTGGTCAGGCGGGATACCCTCCTTGTCCTGAATCTTC 1683903 Query 48644 TGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTG 48703 ||| | | | ||||| |||| ||||| ||| | || ||||| || || ||| Sbjct 1683902 GACTTAACATTGTCGATGGTGTCGGACGACTCGACCTCAAGAGTGATGGTCTTGCCCGTG 1683843 Query 48704 AGAGTTTTCACAAAAATCTGCAT 48726 |||||||| ||||| || ||||| Sbjct 1683842 AGAGTTTTGACAAAGATTTGCAT 1683820 Score = 87.8 bits (96), Expect = 2e-12 Identities = 165/238 (69%), Gaps = 6/238 (3%) Strand=Plus/Plus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 ||| || |||| | | ||| || || || ||||||||||| || |||||||| || || Sbjct 3941178 ACCACCACGCAGGCGCAGCACCAAGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTC-GC 3941236 Query 48559 CAATTGT-CGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCG 48617 | || || | ||||| ||||||||||| || | || | ||||| || || | Sbjct 3941237 TCAGGGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAGATGAGTCGCTGTTGGTCGGGGG 3941296 Query 48618 GCACACTTTCCTTGTCCATAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTC 48675 | | | ||||||||| || || ||||| | | || ||||| |||| |||||| Sbjct 3941297 GGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCG--ATGGTGTCGGAAGACTC 3941354 Query 48676 CGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATCGTGTCT 48733 | ||| | || || || || || ||||| || || || |||||||||||| || || Sbjct 3941355 CACCTCAAGGGTGATAGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTTGCCT 3941412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421249315822367