Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metarhizium_20robertsii_20[genbank_20GCA_5F000591435.1_202014-03-17] 367 sequences; 40,317,276 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq30 203 4e-47 seq3 100 4e-16 >seq30 Length=309456 Score = 203 bits (224), Expect = 4e-47 Identities = 739/1142 (65%), Gaps = 16/1142 (1%) Strand=Plus/Minus Query 62897 AGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCA 62956 ||| || || || || || || ||||| | || | | |||| | ||||||||||| Sbjct 47932 AGAGGCAAGGTTGCAGACAGCCACCTCGTCAGGGGCAGAGTATTCAACAATCTCAGTGCA 47873 Query 62957 AAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 63016 ||| ||| | ||| || || | || | || || ||||| ||||| || ||||| Sbjct 47872 AAGGTTAGAGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTCTTGTTGCAGGCATC 47813 Query 63017 CTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGAC 63076 ||| || || ||||| ||| ||||||| || |||||| || | || | | ||||| Sbjct 47812 CTTGTAGAGCATGAAGGGATTACCAGTCTCGGTCTGAGCCTCAAGGATGGAGTACCAGA- 47754 Query 63077 GACTC-GAGCCTTTATTATAGATTTGTATCTCCTTTCTCTTTCGTATAGTGTATACAATC 63135 | || ||||| || | | | | |||| ||||| | |||| Sbjct 47753 GCTTCTGAGCCCGAATGGTCCTACGGCCCTTGCCCTCTCGCTCGTACTTTTCGTACAGAG 47694 Query 63136 GTTCGAACTCGTCTCCCCAAA-CATTGTCCAAT-CCAGGACATTCATCCGGACACATCAA 63193 |||||||| ||| ||| | || | ||| ||||| ||||| | |||||||||| Sbjct 47693 CCTCGAACTC--CTCACCATAGCAGTCGGCAAGGCCAGGGCATTCGTTGGGACACATCAG 47636 Query 63194 CGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTAT 63253 | ||| || |||| | || || || ||||| ||||| || |||||||| || || | Sbjct 47635 AGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGGTCGGGAATCCAGAGGGCAAG 47576 Query 63254 AAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGC 63313 || ||||| | | | |||||| || || || ||| | |||||||||||| | Sbjct 47575 GAAAAGATCACGAGCACGGACTTCCTCCTTGCCGTGGTTTTTTCTGAGATCGAGGAACTC 47516 Query 63314 CATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCC 63373 | || ||||| ||||| || |||| ||| || || | | || || || ||||| || Sbjct 47515 GAAAACATCAGCGTGCCAAGGCTCCAGGTAGATTGCAAAGGCACCGGGACGCTTGTTGCC 47456 Query 63374 TCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTT 63433 ||||| || | ||||| || ||||| || | || | | ||| ||||| || ||||| Sbjct 47455 ACCCTGGTCAACATATCTGGCAGTGTTGTTGAACACACGGAGCATGGGAATGATGCCGTT 47396 Query 63434 TGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGAT 63491 || | || |||||||| | || || ||| |||||||||| | |||| Sbjct 47395 GGAGGTGCCGTTGGTACCAGCAATGTAAGAGCCAGTGGCACGAATGCGGTGGACATTG-- 47338 Query 63492 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATA 63551 ||||| || || || ||||| || || || | || || || | ||||| ||||| Sbjct 47337 AGACCGATGCCACCGGCCATCTTGGAAATCATGGCACAAGTCTTGAGAGTGTCGTAGATG 47278 Query 63552 CCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTA 63611 || || || || ||||| |||||| | || || || ||| | ||| || | Sbjct 47277 CCGTCGATACTGTCATCCTTCATGTCCACAAGGAAGCACGAAGAAAGCTGGGCTTGAGGA 47218 Query 63612 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTG 63671 || || ||||| || | ||||| || || || || || |||| || | || ||| Sbjct 47217 GTACCAGCATTGAAGAGTGTAGGTGAGGCATGGGTGAAGAATTTGCTTGACATGAGGTTG 47158 Query 63672 TACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAAC 63731 || || ||||| | || || | | || || || || |||||||| | | Sbjct 47157 TAGGTTTCAATGACGCGCTCAATGTTGTCTCCCCAGATACCGACAGCAACACGCATAATC 47098 Query 63732 ATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAA 63791 || || ||||||| |||||||||||| ||| | |||| | || ||| |||| Sbjct 47097 ATATGTTGAGGTCGTTCAACGATCTTACCGTTGAGCTTCAGAAGATATGATCGCTCCAGG 47038 Query 63792 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGT 63851 || || || |||||||| | ||| ||||| | ||||| | ||| |||||| ||| Sbjct 47037 GTCTTGAAGCCAAAATACTGGTAGTTGAAGTCCCTGTCGTAGACAATGGCCGAGTCGAGC 46978 Query 63852 TTATCCTTATATTTGTTAACTATATCCATGGTGATACTT-GAAATAATCGGAGAATGTTT 63910 | ||||| | | | | || || ||| | ||| ||||| || || || Sbjct 46977 TCGTCCTTGTGTCTCATGACGCACTCGTACGTG-TCCTTGGAAATCATGGGCGAGGCACG 46919 Query 63911 CCCATTTTTAGGATTAACATAGTTGAATAAATC-CT-CCATCACTTCACTAAATAGtttt 63968 | |||| || ||||| || |||| | | | ||| || || || || || | || Sbjct 46918 CTCATTCTTGGGATTGACGTAGTGGTACAGATCGCTGACAACAGAAGAC--CATTGCTTC 46861 Query 63969 tttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGA 64028 || || | |||||| | ||| || ||||| || | |||||| || ||||| || || || Sbjct 46860 TTGGTCTGCTTGTGCAAATTGGAGACGGCGATACGGGCGGCGAGGATGGCGTAGTCGGGG 46801 Query 64029 TG 64030 || Sbjct 46800 TG 46799 >seq3 Length=2231953 Score = 100 bits (110), Expect = 4e-16 Identities = 290/442 (66%), Gaps = 16/442 (4%) Strand=Plus/Plus Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072 |||||||| ||||| || || ||||| || || || || || || | | || || ||| Sbjct 1241639 TTTTGGTAGTCACCAACTCGCTTTTCAAAGAAGTTGGTCTTGCCGCCAAGAGAAATGTTT 1241698 Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 33132 |||||||| || || ||||||| || || | || | ||| | | | | Sbjct 1241699 TCCATGAAGTCGAAGGGATTGGACGTTTTGTACACCTTCTCGTTTCCAAGAGCGACCAAC 1241758 Query 33133 AATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 33192 || | ||| || |||||||| || || ||||||| | | ||||| || |||| Sbjct 1241759 AAACGATCAGCAACGAATTCAATGTACTGCTTCATCAAATTGGAGTTCATGCC---AAGT 1241815 Query 33193 TTAACT---GGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATA 33249 | | || |||||| |||| | ||||||||| ||||| | || || ||||| || Sbjct 1241816 AGAGCGCAGGGCAGAGCCTCAGTCAAAAATTCTTGCTCAATAGCGACAGCGTCTGTAATG 1241875 Query 33250 AT-----AGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAAC 33304 || |||| || || ||| || | ||| | | || | || | | Sbjct 1241876 ATGTCGTAGATG--AC--TTGCTTG-CTAGCGCGATTCTTGAGGTGGGAATGCAGGAGGC 1241930 Query 33305 ATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTC 33364 | || || || |||||||||||| || | | || || |||||||| || || || | Sbjct 1241931 AGGCAAAGTCAGTGTGCAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGAC 1241990 Query 33365 CGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGA 33424 | ||||| ||||| ||||| || ||||| || || || ||||||| ||| ||||||| Sbjct 1241991 CTGGCATGAGGCCGCGCTTCTTCAGCCAGAAGATAGAGGCGAATGCACCACTGAAGAAGA 1242050 Query 33425 TTCCTTCTACTGCAGCAAAGGC 33446 | || || || ||||| || || Sbjct 1242051 TGCCCTCAACAGCAGCGAACGC 1242072 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622944342229720