Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metarhizium_20robertsii_20[genbank_20GCA_5F000591435.1_202014-03-17]
367 sequences; 40,317,276 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq1 104 2e-17
>seq1
Length=5053378
Score = 104 bits (114), Expect = 2e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | || || || || || |||||||| | || || | ||||||||| ||
Sbjct 1684349 ATGCAAATCTTCGTCAAGACTTTGACTGGAAAGACAATCACGTTAGAAGTCGAGTCCTCG 1684408
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||| || || | |||||| ||||||| || ||||||||||| || |||||||||
Sbjct 1684409 GACACGATTGACAATGTCAAATCAAAGATTCAGGATAAAGAAGGCATTCCCCCCGATCAA 1684468
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
||| | || || | | || ||||| ||||| || | | ||| | ||||| |||
Sbjct 1684469 CAGCGTCTTATCTTTGCTGGTAAGCAGCTCGAGGACGGCCGAACGCTGTCTGATTACAAC 1684528
Query 24171 ATTCAAAAAGAATCTAC 24187
||||| || || |||||
Sbjct 1684529 ATTCAGAAGGAGTCTAC 1684545
Score = 86.0 bits (94), Expect = 5e-12
Identities = 126/175 (72%), Gaps = 4/175 (2%)
Strand=Plus/Plus
Query 24015 ACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAA 24074
|| ||||| | || ||| |||| || ||| | |||||||||||| | |||||
Sbjct 1684145 ACCGGAAAGACCATCACCCTCGAGGTGGAGTCATCCGACACCATCGACAACGTCAAGTCG 1684204
Query 24075 AAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAG 24134
||||| ||||| || || || |||||||| |||||| | ||||||| || |||||
Sbjct 1684205 AAGATCCAGGACAAGGAGGGTATTCCTCCCGACCAACAGCGCCTGATTTTCGCTGGCAAA 1684264
Query 24135 CAACTCGAAGATGACAG-AAAC-GTCAGCGATTATAACATTCAAAAAGAATCTAC 24187
|| || ||||||| | | | || ||| ||| ||||| || ||||| || || ||
Sbjct 1684265 CAGCTTGAAGATGGCCGCACACTGTC--CGACTATAATATCCAAAAGGAGTCCAC 1684317
Score = 82.4 bits (90), Expect = 7e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | ||||| ||||| | || || || | || || | || |||||| | |
Sbjct 1683820 ATGCAAATCTTTGTCAAAACTCTCACGGGCAAGACCATCACTCTTGAGGTCGAGTCGTCC 1683879
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||||||||| | || || |||||| ||||| || || || || || || |||
Sbjct 1683880 GACACCATCGACAATGTTAAGTCGAAGATTCAGGACAAGGAGGGTATCCCGCCTGACCAA 1683939
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
||| | | |||| || |||||||| || || |||| | | | | || ||||| |||
Sbjct 1683940 CAGCGCTTAATTTTCGCTGGCAAGCAGCTTGAGGATGGCCGTACCCTCTCGGATTACAAC 1683999
Query 24171 ATTCAAAAAGAATCTACAATTCA 24193
|| || || ||||| || ||||
Sbjct 1684000 ATCCAGAAGGAATCCACCCTTCA 1684022
Score = 82.4 bits (90), Expect = 7e-11
Identities = 135/195 (69%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046
||| ||||| | || || || || | || || || | || ||| | || || ||| |
Sbjct 3941409 CAAGATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACTATCACCCTTGAGGTGGAGTC 3941350
Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106
|||||||||||| | ||||| ||||| ||||| || ||||| || |||||
Sbjct 3941349 TTCCGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGA 3941290
Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166
|||||| |||| || | || || ||||| ||||| |||| | | | | | ||||| ||
Sbjct 3941289 CCAACAGCGACTCATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTA 3941230
Query 24167 TAACATTCAAAAAGA 24181
||||| || || ||
Sbjct 3941229 CAACATCCAGAAGGA 3941215
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429934076976885
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |