Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metarhizium_20robertsii_20[genbank_20GCA_5F000591435.1_202014-03-17] 367 sequences; 40,317,276 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq1 104 2e-17 >seq1 Length=5053378 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || || |||||||| | || || | ||||||||| || Sbjct 1684349 ATGCAAATCTTCGTCAAGACTTTGACTGGAAAGACAATCACGTTAGAAGTCGAGTCCTCG 1684408 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | |||||| ||||||| || ||||||||||| || ||||||||| Sbjct 1684409 GACACGATTGACAATGTCAAATCAAAGATTCAGGATAAAGAAGGCATTCCCCCCGATCAA 1684468 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | || || | | || ||||| ||||| || | | ||| | ||||| ||| Sbjct 1684469 CAGCGTCTTATCTTTGCTGGTAAGCAGCTCGAGGACGGCCGAACGCTGTCTGATTACAAC 1684528 Query 24171 ATTCAAAAAGAATCTAC 24187 ||||| || || ||||| Sbjct 1684529 ATTCAGAAGGAGTCTAC 1684545 Score = 86.0 bits (94), Expect = 5e-12 Identities = 126/175 (72%), Gaps = 4/175 (2%) Strand=Plus/Plus Query 24015 ACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAA 24074 || ||||| | || ||| |||| || ||| | |||||||||||| | ||||| Sbjct 1684145 ACCGGAAAGACCATCACCCTCGAGGTGGAGTCATCCGACACCATCGACAACGTCAAGTCG 1684204 Query 24075 AAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAG 24134 ||||| ||||| || || || |||||||| |||||| | ||||||| || ||||| Sbjct 1684205 AAGATCCAGGACAAGGAGGGTATTCCTCCCGACCAACAGCGCCTGATTTTCGCTGGCAAA 1684264 Query 24135 CAACTCGAAGATGACAG-AAAC-GTCAGCGATTATAACATTCAAAAAGAATCTAC 24187 || || ||||||| | | | || ||| ||| ||||| || ||||| || || || Sbjct 1684265 CAGCTTGAAGATGGCCGCACACTGTC--CGACTATAATATCCAAAAGGAGTCCAC 1684317 Score = 82.4 bits (90), Expect = 7e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| ||||| | || || || | || || | || |||||| | | Sbjct 1683820 ATGCAAATCTTTGTCAAAACTCTCACGGGCAAGACCATCACTCTTGAGGTCGAGTCGTCC 1683879 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | || || |||||| ||||| || || || || || || ||| Sbjct 1683880 GACACCATCGACAATGTTAAGTCGAAGATTCAGGACAAGGAGGGTATCCCGCCTGACCAA 1683939 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | | |||| || |||||||| || || |||| | | | | || ||||| ||| Sbjct 1683940 CAGCGCTTAATTTTCGCTGGCAAGCAGCTTGAGGATGGCCGTACCCTCTCGGATTACAAC 1683999 Query 24171 ATTCAAAAAGAATCTACAATTCA 24193 || || || ||||| || |||| Sbjct 1684000 ATCCAGAAGGAATCCACCCTTCA 1684022 Score = 82.4 bits (90), Expect = 7e-11 Identities = 135/195 (69%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 ||| ||||| | || || || || | || || || | || ||| | || || ||| | Sbjct 3941409 CAAGATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACTATCACCCTTGAGGTGGAGTC 3941350 Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 |||||||||||| | ||||| ||||| ||||| || ||||| || ||||| Sbjct 3941349 TTCCGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGA 3941290 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166 |||||| |||| || | || || ||||| ||||| |||| | | | | | ||||| || Sbjct 3941289 CCAACAGCGACTCATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTA 3941230 Query 24167 TAACATTCAAAAAGA 24181 ||||| || || || Sbjct 3941229 CAACATCCAGAAGGA 3941215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429934076976885