Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metarhizium_20robertsii_20[genbank_20GCA_5F000591435.1_202014-03-17]
367 sequences; 40,317,276 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq223 140 2e-28
seq1 98.7 7e-16
>seq223
Length=8226
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 6154 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 6095
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 6094 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 6060
>seq1
Length=5053378
Score = 98.7 bits (108), Expect = 7e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||| | | |||| || | || ||||| |||||| ||||| ||||||||||
Sbjct 1684577 TACCACCACGAAGTCGCAGGACAAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAATCAG 1684518
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
||| || |||| || | || || || ||||| || || || |||||||||| ||
Sbjct 1684517 ACAGCGTTCGGCCGTCCTCGAGCTGCTTACCAGCAAAGATAAGACGCTGTTGATCGGGGG 1684458
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
| | ||||||||| ||| ||| ||| || ||||| | | || || || |
Sbjct 1684457 GAATGCCTTCTTTATCCTGAATCTTTGATTTGACATTGTCAATCGTGTCCGAGGACTCGA 1684398
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
||||||| || || || || || ||||| || || ||||| || |||||
Sbjct 1684397 CTTCTAACGTGATTGTCTTTCCAGTCAAAGTCTTGACGAAGATTTGCAT 1684349
Score = 93.3 bits (102), Expect = 3e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 38114 ATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTG 38173
||| || ||||||||||| || ||||| || || | || |||| || | ||
Sbjct 1684780 ATGCAGGGTGCTCTCCTTCTGGATATTATAGTCGCTGAGGGTGCGACCGTCTTCCAGCTG 1684721
Query 38174 TTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTT 38233
|| || ||||| || || || ||||| || | ||| | |||||| ||||| ||| ||
Sbjct 1684720 CTTGCCAGCAAAGATAAGACGCTGTTGGTCAGGGGGAATGCCTTCCTTGTCTTGAATCTT 1684661
Query 38234 TTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGT 38293
| ||| ||||| | | |||||| | ||| ||||| ||||| ||||| || || ||
Sbjct 1684660 TGACTTGACATTGTCAATAGTATCGCTGGATTCCACTTCCAATGTGATAGTCTTGCCAGT 1684601
Query 38294 CAAGGTTTTCACGAATATCTGCAT 38317
||| || || ||||| || |||||
Sbjct 1684600 CAAAGTCTTGACGAAGATTTGCAT 1684577
Score = 84.2 bits (92), Expect = 1e-11
Identities = 157/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149
|||||| | || |||| |||||| || || ||||||||||| || || ||||| ||
Sbjct 3941178 ACCACCACGCAGGCGCAGCACCAAGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCT 3941237
Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209
|| || | || || | || || || || || || || || ||||| |||| |||
Sbjct 3941238 CAGGGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAGATGAGTCGCTGTTGGTCGGGGGG 3941297
Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269
|| ||| || |||||| || || ||| || || | || || || | || ||
Sbjct 3941298 GATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCAC 3941357
Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320
|| | || ||||| || ||||| | ||| || ||||| |||||||| ||
Sbjct 3941358 CTCAAGGGTGATAGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTT 3941408
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334945701843977
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |