Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metarhizium_20robertsii_20[genbank_20GCA_5F000591435.1_202014-03-17]
367 sequences; 40,317,276 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq1 118 9e-22
>seq1
Length=5053378
Score = 118 bits (130), Expect = 9e-22
Identities = 146/200 (73%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 25011 GTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAG 25070
|| ||||| | ||||| || ||||||| |||| |||||||| || ||||| |||||
Sbjct 1684133 GTCAAGACCCTCACCGGAAAGACCATCACCCTCGAGGTGGAGTCATCCGACACCATCGAC 1684192
Query 25071 TCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATT 25130
| ||| || ||| ||||| || || ||||| || ||||||||||| | |||
Sbjct 1684193 AACGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCTCCCGACCAACAGCGCCTGATT 1684252
Query 25131 TTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAA 25190
|| || |||||||| | ||||||| ||||| || ||| || ||||| ||||| ||
Sbjct 1684253 TTCGCTGGCAAACAGCTTGAAGATGGCCGCACACTGTCCGACTATAATATCCAAAAGGAG 1684312
Query 25191 TCCACGCTACATTTAGTGCT 25210
||||| |||||| | || ||
Sbjct 1684313 TCCACTCTACATCTTGTCCT 1684332
Score = 118 bits (130), Expect = 9e-22
Identities = 158/215 (73%), Gaps = 6/215 (3%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || ||||||||||| || || | |||||| | |||||||| ||
Sbjct 1684577 ATGCAAATCTTCGTCAAGACTTTGACTGGCAAGACTATCACATTGGAAGTGGAATCCAGC 1684636
Query 25059 GACACTATCGAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
|| ||||| || || || ||| |||| | ||| ||||| ||||| ||||| ||||||
Sbjct 1684637 GATACTATTGA--CAATGTCAAGTCAAAGATTCA-AGACAAGGAAGGCATTCCCCCTGAC 1684693
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
|||||||| |||| ||||| ||||| || | ||||| | |||||| | |||| ||
Sbjct 1684694 CAACAGCGTCTTATCTTTGCTGGCAAGCAGCTGGAAGACGGTCGCACCCTCAGCGACTAT 1684753
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
||||| || || || ||| || ||| | || ||
Sbjct 1684754 AATATCCAGAAGGAGAGCACCCTGCATCTCGTTCT 1684788
Score = 104 bits (114), Expect = 2e-17
Identities = 154/214 (72%), Gaps = 6/214 (3%)
Strand=Plus/Plus
Query 24991 ACGGAACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGG 25050
||| | | |||||||| ||||| || ||| | || || || ||||||| | || || |
Sbjct 1683812 ACGCAGCCATGCAAATCTTTGTCAAAACTCTCACGGGCAAGACCATCACTCTTGAGGTCG 1683871
Query 25051 AGTCGTCTGACACTATCGAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTC 25107
||||||| ||||| ||||| || || ||| | || | ||| ||||| || || || |
Sbjct 1683872 AGTCGTCCGACACCATCGA--CAATGTTAAGTCGAAGATTCAG-GACAAGGAGGGTATCC 1683928
Query 25108 CACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGG 25167
| |||||||||||||| | ||||| || ||||| || | || |||| || || |
Sbjct 1683929 CGCCTGACCAACAGCGCTTAATTTTCGCTGGCAAGCAGCTTGAGGATGGCCGTACCCTCT 1683988
Query 25168 GCGATTACAATATTCAAAAAGAATCCACGCTACA 25201
|||||||| || || || |||||||| || ||
Sbjct 1683989 CGGATTACAACATCCAGAAGGAATCCACCCTTCA 1684022
Score = 102 bits (112), Expect = 7e-17
Identities = 148/206 (72%), Gaps = 6/206 (3%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || ||||||||||| || || | ||||| | ||||| ||||| ||
Sbjct 1684349 ATGCAAATCTTCGTCAAGACTTTGACTGGAAAGACAATCACGTTAGAAGTCGAGTCCTCG 1684408
Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
||||| || || || || || |||| | ||| || |||||||| ||||| || ||
Sbjct 1684409 GACACGATTGA--CAATGTCAAATCAAAGATTCA-GGATAAAGAAGGCATTCCCCCCGAT 1684465
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
|||||||| |||| ||||| || || || | || || | || || || ||||||
Sbjct 1684466 CAACAGCGTCTTATCTTTGCTGGTAAGCAGCTCGAGGACGGCCGAACGCTGTCTGATTAC 1684525
Query 25176 AATATTCAAAAAGAATCCACGCTACA 25201
|| ||||| || || || || || ||
Sbjct 1684526 AACATTCAGAAGGAGTCTACTCTCCA 1684551
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433326061805105
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |