Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metarhizium_20robertsii_20[genbank_20GCA_5F000591435.1_202014-03-17] 367 sequences; 40,317,276 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq1 136 3e-27 seq10 100 2e-16 >seq1 Length=5053378 Score = 136 bits (150), Expect = 3e-27 Identities = 149/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| |||||| | || || || || |||||||||| || || | || Sbjct 1683820 ATGCAAATCTTTGTCAAAACTCTCACGGGCAAGACCATCACTCTTGAGGTCGAGTCGTCC 1683879 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| || | || || ||||| |||||||||||||| || || || ||| Sbjct 1683880 GACACCATCGACAATGTTAAGTCGAAGATTCAGGACAAGGAGGGTATCCCGCCTGACCAA 1683939 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || || || ||||| ||| | |||||| ||| ||| |||| ||||||||| Sbjct 1683940 CAGCGCTTAATTTTCGCTGGCAAGCAGCTTGAGGATGGCCGTACCCTCTCGGATTACAAC 1683999 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || ||||||||| Sbjct 1684000 ATCCAGAAGGAATCCACC 1684017 Score = 127 bits (140), Expect = 2e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || ||||| || || || || |||| | ||||||||| ||| | Sbjct 1684577 ATGCAAATCTTCGTCAAGACTTTGACTGGCAAGACTATCACATTGGAAGTGGAATCCAGC 1684636 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | ||| || |||| ||| |||||||||||||| || ||||| || || ||| Sbjct 1684637 GATACTATTGACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGCATTCCCCCTGACCAA 1684696 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || |||||||| ||||| ||||| ||| | || || |||||| || ||| || || Sbjct 1684697 CAGCGTCTTATCTTTGCTGGCAAGCAGCTGGAAGACGGTCGCACCCTCAGCGACTATAAT 1684756 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTT 22428 || || || || |||| | ||| | ||| Sbjct 1684757 ATCCAGAAGGAGAGCACCCTGCATCTCGTT 1684786 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || ||||| || || || || |||| | ||||| || || | Sbjct 1684349 ATGCAAATCTTCGTCAAGACTTTGACTGGAAAGACAATCACGTTAGAAGTCGAGTCCTCG 1684408 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || ||||| ||| ||||| || || || || ||||| ||||||||| Sbjct 1684409 GACACGATTGACAATGTCAAATCAAAGATTCAGGATAAAGAAGGCATTCCCCCCGATCAA 1684468 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || |||||||| ||||| || || ||| | ||||| ||| || | || ||||||||| Sbjct 1684469 CAGCGTCTTATCTTTGCTGGTAAGCAGCTCGAGGACGGCCGAACGCTGTCTGATTACAAC 1684528 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || || || || | || | || ||||| | || || ||| Sbjct 1684529 ATTCAGAAGGAGTCTACTCTCCACCTTGTCCTGCGACTTCGTGGTGGT 1684576 Score = 116 bits (128), Expect = 3e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 ||||| || || |||| || || ||||| | |||| ||| | ||| | |||| Sbjct 1684145 ACCGGAAAGACCATCACCCTCGAGGTGGAGTCATCCGACACCATCGACAACGTCAAGTCG 1684204 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||||||||| ||||| ||||| || || || || || |||||| Sbjct 1684205 AAGATCCAGGACAAGGAGGGTATTCCTCCCGACCAACAGCGCCTGATTTTCGCTGGCAAA 1684264 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 ||| | || ||| |||||| | ||||| || || || ||||| || ||||| ||||| Sbjct 1684265 CAGCTTGAAGATGGCCGCACACTGTCCGACTATAATATCCAAAAGGAGTCCACTCTACAT 1684324 Query 22423 TTAGTTTTGCGATTGCGCGGAGGT 22446 | || ||||| | || || ||| Sbjct 1684325 CTTGTCCTGCGACTTCGTGGTGGT 1684348 Score = 111 bits (122), Expect = 1e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||| ||||| || || || | || || || || |||| ||||| ||||| | Sbjct 3941408 AAGATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACTATCACCCTTGAGGTGGAGTCT 3941349 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 |||| ||| | ||| | |||| || || || ||||||||||| || || ||||| Sbjct 3941348 TCCGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGAC 3941289 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 ||||| || || || || || || || ||| | |||||| ||||||| | ||| ||| Sbjct 3941288 CAACAGCGACTCATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTAC 3941229 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || || || |||| | || || || |||| |||| || ||| Sbjct 3941228 AACATCCAGAAGGAGAGCACCCTGCACTTGGTGCTGCGCCTGCGTGGTGGT 3941178 >seq10 Length=656475 Score = 100 bits (110), Expect = 2e-16 Identities = 130/180 (72%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286 |||||| || || | || || || || | || ||||| || || || ||||||| | Sbjct 568096 TTTTGTGAAGACCCTGACGGGCAAGACCATTACCCTTGAGGTCGAGTCCTCCGATACGAT 568037 Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346 ||| || |||| || || || ||||||||||||||||| || || || || || | Sbjct 568036 CGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATTCCCCCGGACCAGCAGCGATT 567977 Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 || ||||| ||||||||| | |||||| ||| || | ||||| |||||||| || || Sbjct 567976 GATCTTTGCTGGCAAACAGCTCGAGGATGGCCGAACTTTGTCCGACTACAACATCCAGAA 567917 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419726122635355