Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metarhizium_20robertsii_20[genbank_20GCA_5F000591435.1_202014-03-17]
367 sequences; 40,317,276 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq1 154 3e-32
seq2 89.7 1e-12
>seq1
Length=5053378
Score = 154 bits (170), Expect = 3e-32
Identities = 172/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303
|| || || || || | || |||||||| | ||||| || || |||||||||||||||
Sbjct 1684806 TGGCCGCCACGAAGACGGAGAACGAGATGCAGGGTGCTCTCCTTCTGGATATTATAGTCG 1684747
Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363
||| ||||| |||||||| | || || || || ||||| ||||||||||| |
Sbjct 1684746 CTGAGGGTGCGACCGTCTTCCAGCTGCTTGCCAGCAAAGATAAGACGCTGTTGGTCAGGG 1684687
Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| || ||||| || || || || || | || || || || |||| |||||| |||||
Sbjct 1684686 GGAATGCCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTATCGCTGGATTCC 1684627
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| | ||||| ||||| || |||| |||||||||||| || |||||
Sbjct 1684626 ACTTCCAATGTGATAGTCTTGCCAGTCAAAGTCTTGACGAAGATTTGCAT 1684577
Score = 134 bits (148), Expect = 3e-26
Identities = 160/217 (74%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || |||| || || ||||| | ||| || |||||||||||||||||||
Sbjct 1684347 CCACCACGAAGTCGCAGGACAAGATGTAGAGTGGACTCCTTTTGGATATTATAGTCGGAC 1684288
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| || ||||| | ||||| || ||||| ||||| |||||||| ||
Sbjct 1684287 AGTGTGCGGCCATCTTCAAGCTGTTTGCCAGCGAAAATCAGGCGCTGTTGGTCGGGAGGA 1684228
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || || || |||||||| |||| || ||||| || || | ||| || || ||
Sbjct 1684227 ATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCGGATGACTCCACC 1684168
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463
||||| ||||| ||||| ||||| || ||||||||||
Sbjct 1684167 TCGAGGGTGATGGTCTTTCCGGTGAGGGTCTTGACGA 1684131
Score = 113 bits (124), Expect = 1e-19
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 288277 GTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCT 288336
||||| || || ||||| || |||||| || ||||| || || || | || || ||
Sbjct 3941209 GTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTACCA 3941268
Query 288337 GCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTC 288396
|||||||| || |||||||| ||||| || || || |||||||| || | ||
Sbjct 3941269 GCGAAGATGAGTCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTG 3941328
Query 288397 ACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456
||||| || || | ||| || || || || || ||||| |||||||| || || |||
Sbjct 3941329 ACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTCCCCGTGAGGGTC 3941388
Query 288457 TTGACGAATATCTGCAT 288473
|||||||| ||||||||
Sbjct 3941389 TTGACGAAAATCTGCAT 3941405
Score = 109 bits (120), Expect = 1e-18
Identities = 163/230 (71%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || |||| || || || || | || || || || || || || || |
Sbjct 1684575 CCACCACGAAGTCGCAGGACAAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAATCAGAC 1684516
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
||||| || ||||| || | || || || || ||||| |||||||||||| || |||
Sbjct 1684515 AGCGTTCGGCCGTCCTCGAGCTGCTTACCAGCAAAGATAAGACGCTGTTGA---TCGGGG 1684459
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| |||||||||||||| || || | ||| || || || || | || || ||
Sbjct 1684458 GGAATGCCTTCTTTATCCTGAATCTTTGATTTGACATTGTCAATCGTGTCCGAGGACTCG 1684399
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| | |||||| ||||| || |||| |||||||||||| || |||||
Sbjct 1684398 ACTTCTAACGTGATTGTCTTTCCAGTCAAAGTCTTGACGAAGATTTGCAT 1684349
>seq2
Length=4734625
Score = 89.7 bits (98), Expect = 1e-12
Identities = 202/291 (69%), Gaps = 12/291 (4%)
Strand=Plus/Minus
Query 325964 ACGATAGGCGTGATGAACTTCTT-CAAGAACCCTGGAATTTCTAGAAGATTAGGGAAACA 326022
|| || |||||||| || ||||| || |||| || |||| || | || |||| |||
Sbjct 3851429 ACAATGGGCGTGATAAA-TTCTTGCAGGAACTGAGGGATTTTCAGTA-ATGAGGGGAACT 3851372
Query 326023 GCTATGGAA-AAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGG 326081
| | ||| |||||| || | ||| || ||||||| | |||||| |||| || |
Sbjct 3851371 GAACTTGAAGAAAGTTAATAAGGAGGCCCTTAATGTGACTACCGTCATGATCCTGATCAG 3851312
Query 326082 TCATGATCATCACATGACCGTAACGAAGCGAGGACGTGTCTTTGTACACTT-TACCGGTT 326140
|||||||||| | ||||| |||||||| || || |||| |||| | |||
Sbjct 3851311 TCATGATCATAAGGTGACCATAACGAAGACTCTTTGTATCCGTGTATACTTGTTTGTGTT 3851252
Query 326141 TGAAGGCCGAGAATTTGTTTGA-GCGCTGTGATTTCTTCGTTCTTCGTGATGCTTG--CC 326197
| ||| | |||| ||| |||| ||| ||||||| |||||| ||||| ||| |
Sbjct 3851251 TTAAGCCTAAGAA-TTGCTTGATATTCTG-AATTTCTTGGTTCTTGGTGAT--TTGATCG 3851196
Query 326198 ACGGATGCATCGCGGACGTTCAATAGTTTTCCACGAAGAGGGAACACTCCA 326248
| || || || ||||| || | |||||| || ||||| ||||| || |||
Sbjct 3851195 AGTGAAGCGTCTCGGACATTAAGTAGTTTGCCTCGAAGGGGGAAAACACCA 3851145
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179648853043826
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |