Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metarhizium_20robertsii_20[genbank_20GCA_5F000591435.1_202014-03-17] 367 sequences; 40,317,276 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq1 154 3e-32 seq2 89.7 1e-12 >seq1 Length=5053378 Score = 154 bits (170), Expect = 3e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || || || || || | || |||||||| | ||||| || || ||||||||||||||| Sbjct 1684806 TGGCCGCCACGAAGACGGAGAACGAGATGCAGGGTGCTCTCCTTCTGGATATTATAGTCG 1684747 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 ||| ||||| |||||||| | || || || || ||||| ||||||||||| | Sbjct 1684746 CTGAGGGTGCGACCGTCTTCCAGCTGCTTGCCAGCAAAGATAAGACGCTGTTGGTCAGGG 1684687 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || ||||| || || || || || | || || || || |||| |||||| ||||| Sbjct 1684686 GGAATGCCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTATCGCTGGATTCC 1684627 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| | ||||| ||||| || |||| |||||||||||| || ||||| Sbjct 1684626 ACTTCCAATGTGATAGTCTTGCCAGTCAAAGTCTTGACGAAGATTTGCAT 1684577 Score = 134 bits (148), Expect = 3e-26 Identities = 160/217 (74%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || |||| || || ||||| | ||| || ||||||||||||||||||| Sbjct 1684347 CCACCACGAAGTCGCAGGACAAGATGTAGAGTGGACTCCTTTTGGATATTATAGTCGGAC 1684288 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || ||||| | ||||| || ||||| ||||| |||||||| || Sbjct 1684287 AGTGTGCGGCCATCTTCAAGCTGTTTGCCAGCGAAAATCAGGCGCTGTTGGTCGGGAGGA 1684228 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| |||| || ||||| || || | ||| || || || Sbjct 1684227 ATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCGGATGACTCCACC 1684168 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463 ||||| ||||| ||||| ||||| || |||||||||| Sbjct 1684167 TCGAGGGTGATGGTCTTTCCGGTGAGGGTCTTGACGA 1684131 Score = 113 bits (124), Expect = 1e-19 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 288277 GTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCT 288336 ||||| || || ||||| || |||||| || ||||| || || || | || || || Sbjct 3941209 GTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTACCA 3941268 Query 288337 GCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTC 288396 |||||||| || |||||||| ||||| || || || |||||||| || | || Sbjct 3941269 GCGAAGATGAGTCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTG 3941328 Query 288397 ACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456 ||||| || || | ||| || || || || || ||||| |||||||| || || ||| Sbjct 3941329 ACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTCCCCGTGAGGGTC 3941388 Query 288457 TTGACGAATATCTGCAT 288473 |||||||| |||||||| Sbjct 3941389 TTGACGAAAATCTGCAT 3941405 Score = 109 bits (120), Expect = 1e-18 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || |||| || || || || | || || || || || || || || | Sbjct 1684575 CCACCACGAAGTCGCAGGACAAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAATCAGAC 1684516 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 ||||| || ||||| || | || || || || ||||| |||||||||||| || ||| Sbjct 1684515 AGCGTTCGGCCGTCCTCGAGCTGCTTACCAGCAAAGATAAGACGCTGTTGA---TCGGGG 1684459 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || |||||||||||||| || || | ||| || || || || | || || || Sbjct 1684458 GGAATGCCTTCTTTATCCTGAATCTTTGATTTGACATTGTCAATCGTGTCCGAGGACTCG 1684399 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| | |||||| ||||| || |||| |||||||||||| || ||||| Sbjct 1684398 ACTTCTAACGTGATTGTCTTTCCAGTCAAAGTCTTGACGAAGATTTGCAT 1684349 >seq2 Length=4734625 Score = 89.7 bits (98), Expect = 1e-12 Identities = 202/291 (69%), Gaps = 12/291 (4%) Strand=Plus/Minus Query 325964 ACGATAGGCGTGATGAACTTCTT-CAAGAACCCTGGAATTTCTAGAAGATTAGGGAAACA 326022 || || |||||||| || ||||| || |||| || |||| || | || |||| ||| Sbjct 3851429 ACAATGGGCGTGATAAA-TTCTTGCAGGAACTGAGGGATTTTCAGTA-ATGAGGGGAACT 3851372 Query 326023 GCTATGGAA-AAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGG 326081 | | ||| |||||| || | ||| || ||||||| | |||||| |||| || | Sbjct 3851371 GAACTTGAAGAAAGTTAATAAGGAGGCCCTTAATGTGACTACCGTCATGATCCTGATCAG 3851312 Query 326082 TCATGATCATCACATGACCGTAACGAAGCGAGGACGTGTCTTTGTACACTT-TACCGGTT 326140 |||||||||| | ||||| |||||||| || || |||| |||| | ||| Sbjct 3851311 TCATGATCATAAGGTGACCATAACGAAGACTCTTTGTATCCGTGTATACTTGTTTGTGTT 3851252 Query 326141 TGAAGGCCGAGAATTTGTTTGA-GCGCTGTGATTTCTTCGTTCTTCGTGATGCTTG--CC 326197 | ||| | |||| ||| |||| ||| ||||||| |||||| ||||| ||| | Sbjct 3851251 TTAAGCCTAAGAA-TTGCTTGATATTCTG-AATTTCTTGGTTCTTGGTGAT--TTGATCG 3851196 Query 326198 ACGGATGCATCGCGGACGTTCAATAGTTTTCCACGAAGAGGGAACACTCCA 326248 | || || || ||||| || | |||||| || ||||| ||||| || ||| Sbjct 3851195 AGTGAAGCGTCTCGGACATTAAGTAGTTTGCCTCGAAGGGGGAAAACACCA 3851145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179648853043826