Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metarhizium_20robertsii_20[genbank_20GCA_5F000591435.1_202014-03-17] 367 sequences; 40,317,276 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq3 98.7 2e-15 seq2 95.1 3e-14 >seq3 Length=2231953 Score = 98.7 bits (108), Expect = 2e-15 Identities = 173/250 (69%), Gaps = 4/250 (2%) Strand=Plus/Minus Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGC--GACGCTATTCCATGCC 243559 ||||| ||||| || || | | || | ||||| |||| || ||| | || ||| Sbjct 1241877 ATCATTACAGACGCTGTCGCTATTGAGCAAGAATT--TTTGACTGAGGCTCTGCCCTGCG 1241820 Query 243560 GGCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCA 243619 || ||||||||||||| | | ||| |||||||| |||||||| || || || Sbjct 1241819 CTCTACTTGGCATGAACTCCAATTTGATGAAGCAGTACATTGAATTCGTTGCTGATCGTT 1241760 Query 243620 TTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGG 243679 | || |||| ||||| | ||||| |||||||| | || ||||| | ||| |||| Sbjct 1241759 TGTTGGTCGCTCTTGGAAACGAGAAGGTGTACAAAACGTCCAATCCCTTCGACTTCATGG 1241700 Query 243680 AGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAAC 243739 | |||||| ||| || || || |||||||| |||||||| || |||| || ||| Sbjct 1241699 AAAACATTTCTCTTGGCGGCAAGACCAACTTCTTTGAAAAGCGAGTTGGTGACTACCAAA 1241640 Query 243740 GCCCTGGTGT 243749 ||||||| Sbjct 1241639 AGGCTGGTGT 1241630 >seq2 Length=4734625 Score = 95.1 bits (104), Expect = 3e-14 Identities = 203/291 (70%), Gaps = 12/291 (4%) Strand=Plus/Minus Query 298085 ACGATAGGCGTGATGAACTTCTT-CAAGAACCCTGGAATTTCTAGAAGATTAGGGAAACA 298143 || || |||||||| || ||||| || |||| || |||| || | || |||| ||| Sbjct 3851429 ACAATGGGCGTGATAAA-TTCTTGCAGGAACTGAGGGATTTTCAGTA-ATGAGGGGAACT 3851372 Query 298144 GCTATGGAA-AAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGG 298202 | | ||| |||||| || | ||| || ||||||| | |||||| |||| || | Sbjct 3851371 GAACTTGAAGAAAGTTAATAAGGAGGCCCTTAATGTGACTACCGTCATGATCCTGATCAG 3851312 Query 298203 TCATGATCATCACATGACCGTAACGAAGCGAGGACGTGTCTTTGTACACTT-TACCGGTT 298261 |||||||||| | ||||| |||||||| || || |||| |||| | ||| Sbjct 3851311 TCATGATCATAAGGTGACCATAACGAAGACTCTTTGTATCCGTGTATACTTGTTTGTGTT 3851252 Query 298262 TGAAGGCCGAGAATTTGTTTGA-GCGCTGTGATTTCTTCGTTCTTCGTGATGCTTG--CC 298318 | ||| | |||| ||| |||| ||| ||||||| |||||| ||||| ||| | Sbjct 3851251 TTAAGCCTAAGAA-TTGCTTGATATTCTG-AATTTCTTGGTTCTTGGTGAT--TTGATCG 3851196 Query 298319 ACGGATGCATCGCGGACATTCAATAGTTTTCCACGAAGAGGGAACACTCCA 298369 | || || || |||||||| | |||||| || ||||| ||||| || ||| Sbjct 3851195 AGTGAAGCGTCTCGGACATTAAGTAGTTTGCCTCGAAGGGGGAAAACACCA 3851145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102874814051450