Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metarhizium_20robertsii_20[genbank_20GCA_5F000591435.1_202014-03-17]
367 sequences; 40,317,276 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq1 136 4e-27
>seq1
Length=5053378
Score = 136 bits (150), Expect = 4e-27
Identities = 163/219 (74%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 41994 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 42053
|||| |||||| |||| ||||||||||| || || ||||| || ||| || || |
Sbjct 3941191 CGCAGCACCAAGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA 3941250
Query 42054 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTG 42113
|| || ||||||||||||||||| ||||||||||| ||||||| || | || |||||||
Sbjct 3941251 TCCTCGAGCTGCTTACCAGCGAAGATGAGTCGCTGTTGGTCGGGGGGGATGCCCTCCTTG 3941310
Query 42114 TCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172
||| ||| || |||| ||| | | | |||||| || ||||| || | |||||
Sbjct 3941311 TCCTGGATCTTGGACTTGA-CGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGAT 3941369
Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 42211
|| || ||||| || ||||| || || || ||||| ||
Sbjct 3941370 AGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTT 3941408
Score = 107 bits (118), Expect = 2e-18
Identities = 141/193 (73%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| ||||| |||||||||| ||| || || |||| || |||||||||||||| ||
Sbjct 1684540 CTCCTTCTGAATGTTGTAATCAGACAGCGTTCGGCCGTCCTCGAGCTGCTTACCAGCAAA 1684481
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135
|| || ||||| || |||| || | || || || ||| ||| | |||| |||||
Sbjct 1684480 GATAAGACGCTGTTGATCGGGGGGAATGCCTTCTTTATCC-TGAATCTTTGATTTGACAT 1684422
Query 42136 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195
| | | |||||| || || || || | |||||| || || || || | ||||| |
Sbjct 1684421 TGTCAATCGTGTCCGAGGACTCGACTTCTAACGTGATTGTCTTTCCAGTCAAAGTCTTGA 1684362
Query 42196 CAAAGATTTGCAT 42208
| |||||||||||
Sbjct 1684361 CGAAGATTTGCAT 1684349
Score = 105 bits (116), Expect = 7e-18
Identities = 148/205 (72%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 42005 ATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTG 42064
||||| ||||||||||| || ||||| || || || || || |||| || |||||
Sbjct 1684780 ATGCAGGGTGCTCTCCTTCTGGATATTATAGTCGCTGAGGGTGCGACCGTCTTCCAGCTG 1684721
Query 42065 CTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTT 42124
||| ||||| || || || ||||| ||||| | || | || ||||||| | ||| | |
Sbjct 1684720 CTTGCCAGCAAAGATAAGACGCTGTTGGTCAGGGGGAATGCCTTCCTTGT-CTTGAATCT 1684662
Query 42125 TTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCG 42183
||| |||| | | | || ||||| |||||||| || | ||||| || ||||| |
Sbjct 1684661 TTGACTTGACATTGTCAATAGTATCGCTGGATTCCACTTCCAATGTGATAGTCTTGCCAG 1684602
Query 42184 TTAGCGTCTTTACAAAGATTTGCAT 42208
| | ||||| || |||||||||||
Sbjct 1684601 TCAAAGTCTTGACGAAGATTTGCAT 1684577
Score = 100 bits (110), Expect = 3e-16
Identities = 139/192 (72%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077
||||| || || |||||||| | || || || | || || |||||||| ||||||||
Sbjct 1684010 TCCTTCTGGATGTTGTAATCCGAGAGGGTACGGCCATCCTCAAGCTGCTTGCCAGCGAAA 1683951
Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137
|| | ||||| ||||| | || | | |||||||||| ||| | || | | | | |
Sbjct 1683950 ATTAAGCGCTGTTGGTCAGGCGGGATACCCTCCTTGTCC-TGAATCTTCGACTTAACATT 1683892
Query 42138 GCC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196
| | | |||||| ||| || || || | |||||||| |||||||| || || || ||
Sbjct 1683891 GTCGATGGTGTCGGACGACTCGACCTCAAGAGTGATGGTCTTGCCCGTGAGAGTTTTGAC 1683832
Query 42197 AAAGATTTGCAT 42208
||||||||||||
Sbjct 1683831 AAAGATTTGCAT 1683820
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543210308011280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |