Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metarhizium_20robertsii_20[genbank_20GCA_5F000591435.1_202014-03-17] 367 sequences; 40,317,276 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq1 136 4e-27 >seq1 Length=5053378 Score = 136 bits (150), Expect = 4e-27 Identities = 163/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 41994 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 42053 |||| |||||| |||| ||||||||||| || || ||||| || ||| || || | Sbjct 3941191 CGCAGCACCAAGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA 3941250 Query 42054 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTG 42113 || || ||||||||||||||||| ||||||||||| ||||||| || | || ||||||| Sbjct 3941251 TCCTCGAGCTGCTTACCAGCGAAGATGAGTCGCTGTTGGTCGGGGGGGATGCCCTCCTTG 3941310 Query 42114 TCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172 ||| ||| || |||| ||| | | | |||||| || ||||| || | ||||| Sbjct 3941311 TCCTGGATCTTGGACTTGA-CGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGAT 3941369 Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 42211 || || ||||| || ||||| || || || ||||| || Sbjct 3941370 AGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTT 3941408 Score = 107 bits (118), Expect = 2e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| ||||| |||||||||| ||| || || |||| || |||||||||||||| || Sbjct 1684540 CTCCTTCTGAATGTTGTAATCAGACAGCGTTCGGCCGTCCTCGAGCTGCTTACCAGCAAA 1684481 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 || || ||||| || |||| || | || || || ||| ||| | |||| ||||| Sbjct 1684480 GATAAGACGCTGTTGATCGGGGGGAATGCCTTCTTTATCC-TGAATCTTTGATTTGACAT 1684422 Query 42136 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | |||||| || || || || | |||||| || || || || | ||||| | Sbjct 1684421 TGTCAATCGTGTCCGAGGACTCGACTTCTAACGTGATTGTCTTTCCAGTCAAAGTCTTGA 1684362 Query 42196 CAAAGATTTGCAT 42208 | ||||||||||| Sbjct 1684361 CGAAGATTTGCAT 1684349 Score = 105 bits (116), Expect = 7e-18 Identities = 148/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 42005 ATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTG 42064 ||||| ||||||||||| || ||||| || || || || || |||| || ||||| Sbjct 1684780 ATGCAGGGTGCTCTCCTTCTGGATATTATAGTCGCTGAGGGTGCGACCGTCTTCCAGCTG 1684721 Query 42065 CTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTT 42124 ||| ||||| || || || ||||| ||||| | || | || ||||||| | ||| | | Sbjct 1684720 CTTGCCAGCAAAGATAAGACGCTGTTGGTCAGGGGGAATGCCTTCCTTGT-CTTGAATCT 1684662 Query 42125 TTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCG 42183 ||| |||| | | | || ||||| |||||||| || | ||||| || ||||| | Sbjct 1684661 TTGACTTGACATTGTCAATAGTATCGCTGGATTCCACTTCCAATGTGATAGTCTTGCCAG 1684602 Query 42184 TTAGCGTCTTTACAAAGATTTGCAT 42208 | | ||||| || ||||||||||| Sbjct 1684601 TCAAAGTCTTGACGAAGATTTGCAT 1684577 Score = 100 bits (110), Expect = 3e-16 Identities = 139/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || || |||||||| | || || || | || || |||||||| |||||||| Sbjct 1684010 TCCTTCTGGATGTTGTAATCCGAGAGGGTACGGCCATCCTCAAGCTGCTTGCCAGCGAAA 1683951 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || | ||||| ||||| | || | | |||||||||| ||| | || | | | | | Sbjct 1683950 ATTAAGCGCTGTTGGTCAGGCGGGATACCCTCCTTGTCC-TGAATCTTCGACTTAACATT 1683892 Query 42138 GCC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | |||||| ||| || || || | |||||||| |||||||| || || || || Sbjct 1683891 GTCGATGGTGTCGGACGACTCGACCTCAAGAGTGATGGTCTTGCCCGTGAGAGTTTTGAC 1683832 Query 42197 AAAGATTTGCAT 42208 |||||||||||| Sbjct 1683831 AAAGATTTGCAT 1683820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543210308011280