Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metarhizium_20robertsii_20[genbank_20GCA_5F000591435.1_202014-03-17] 367 sequences; 40,317,276 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq1 96.9 2e-15 seq10 89.7 3e-13 >seq1 Length=5053378 Score = 96.9 bits (106), Expect = 2e-15 Identities = 151/214 (71%), Gaps = 8/214 (4%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||| | ||||| ||| ||| ||||| ||||| || ||||| ||| | || |||| || Sbjct 1684029 AACGAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAATCCGAGAGGGTACGGCCATCCTC 1683970 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 ||||| || || || || |||| || || ||||| |||| | ||||||||||| Sbjct 1683969 AAGCTGCTTGCCAGCGAAAATTAAGCGCTGTTGGTCAGGCGGGATACCCTCCTTGTCCTG 1683910 Query 34892 AATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGG 34947 ||||||| || || || | ||||| || | ||| || || | || |||| Sbjct 1683909 AATCTTCGACTTAAC--AT--TGTCGATGGTGTCGGACGACTCGACCTCAAGAGTGATGG 1683854 Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | || ||||||||||| || |||||||| ||||| Sbjct 1683853 TCTTGCCCGTGAGAGTTTTGACAAAGATTTGCAT 1683820 Score = 89.7 bits (98), Expect = 3e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | ||||| || ||||| ||||| ||||| ||| | || |||| || Sbjct 3941197 ACCAAGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCG 3941256 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || || || || ||||| || ||||| | || | ||||||||||| Sbjct 3941257 AGCTGCTTACCAGCGAAGATGAGTCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGG 3941316 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| |||||| | || | || | ||| || || | ||| || || || Sbjct 3941317 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTC 3941376 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 |||||||| ||||| || || |||||||| || Sbjct 3941377 CCCGTGAGGGTCTTGACGAAAATCTGCATCTT 3941408 >seq10 Length=656475 Score = 89.7 bits (98), Expect = 3e-13 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 34794 TTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATT 34853 ||||| ||||| ||||| || | |||| |||| || |||||||| || ||||| || Sbjct 567917 TTCTGGATGTTGTAGTCGGACAAAGTTCGGCCATCCTCGAGCTGTTTGCCAGCAAAGATC 567976 Query 34854 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT 34913 | ||| |||||||| | || | ||||||||||| ||||| ||||| | Sbjct 567977 AATCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 568036 Query 34914 ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAA 34972 |||| || || ||| || || | ||| ||||| || ||||| || ||||||||||| Sbjct 568037 ATCGTATCGGAGGACTCGACCTCAAGGGTAATGGTCTTGCCCGTCAGGGTCTTCACAAA 568095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324632147974776