Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metarhizium_20robertsii_20[genbank_20GCA_5F000591435.1_202014-03-17] 367 sequences; 40,317,276 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq30 123 3e-23 >seq30 Length=309456 Score = 123 bits (136), Expect = 3e-23 Identities = 418/649 (64%), Gaps = 4/649 (1%) Strand=Plus/Minus Query 48156 CCAGGACATTCATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATA 48215 ||||| ||||| || |||||||||| | ||| || | | || | || | |||| Sbjct 47661 CCAGGGCATTCGTTGGGACACATCAGAGTCCAGTCGCCGTTCTTCTCGACACGCTTCATG 47602 Query 48216 AATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCA 48275 || | || || ||||| || || | || | ||| | || | | ||| || ||||| Sbjct 47601 AAGAGGTCGGGAATCCAGAGGGCAAGGAAAAGATCACGAGCACGGACTTCCTCCTTGCCG 47542 Query 48276 CTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATT 48335 || || | || || || || || | | |||||| ||||| || || | || ||| Sbjct 47541 TGGTTTTTTCTGAGATCGAGGAACTCGAAAACATCAGCGTGCCAAGGCTCCAGGTAGATT 47482 Query 48336 GCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAA 48395 || | |||| || || || || || || || || | |||||||||||| ||||| | Sbjct 47481 GCAAAGGCACCGGGACGCTTGTTGCCACCCTGGTCAACATATCTGGCAGTGTTGTTGAAC 47422 Query 48396 ACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCA 48455 || | | ||| || | || || || || | || ||||| || | ||| ||| ||| Sbjct 47421 ACACGGAGCATGGGAATGATGCCGTTGGAGGTGCCGTTGGTACCAGCAATGTAAGAGCCA 47362 Query 48456 CTAGCTCTTAT--ATTACTAATTGAAATACCTATACCACCTGCCATTTTAGATATTAGAG 48513 | || | || | |||| | ||| || ||||| ||||| || || || | | Sbjct 47361 GTGGCACGAATGCGGTGGACATTG--AGACCGATGCCACCGGCCATCTTGGAAATCATGG 47304 Query 48514 CACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAA 48573 |||| || || || || || || || || ||||| ||||| |||| | | || | Sbjct 47303 CACAAGTCTTGAGAGTGTCGTAGATGCCGTCGATACTGTCATCCTTCATGTCCACAAGGA 47244 Query 48574 AACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAA 48633 | || ||| | || | ||| ||| || | ||| || | ||| || || ||||| Sbjct 47243 AGCACGAAGAAAGCTGGGCTTGAGGAGTACCAGCATTGAAGAGTGTAGGTGAGGCATGGG 47184 Query 48634 TAAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGAATCTATATCCCATTGAT 48693 | || |||| ||| | | || || |||||||| || || || | | Sbjct 47183 TGAAGAATTTGCTTGACATGAGGTTGTAGGTTTCAATGACGCGCTCAATGTTGTCTCCCC 47124 Query 48694 GTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTCAACAATTTTGTTATTTA 48753 ||||| | || |||||||| | ||||| |||||||| |||||| || || || | Sbjct 47123 AGATACCGACAGCAACACGCATAATCATATGTTGAGGTCGTTCAACGATCTTACCGTTGA 47064 Query 48754 TTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATAGTTGTA 48802 |||| |||||||||| |||| || || || |||||||| | ||| Sbjct 47063 GCTTCAGAAGATATGATCGCTCCAGGGTCTTGAAGCCAAAATACTGGTA 47015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562106221325880