Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metarhizium_20robertsii_20[genbank_20GCA_5F000591435.1_202014-03-17] 367 sequences; 40,317,276 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq16 131 1e-24 seq7 91.5 1e-12 seq1 87.8 1e-11 >seq16 Length=511838 Score = 131 bits (144), Expect = 1e-24 Identities = 257/377 (68%), Gaps = 6/377 (2%) Strand=Plus/Plus Query 552210 AATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACA- 552268 ||||| ||||||||||| ||||| ||||| || | || || ||||| || ||||| | Sbjct 346431 AATCCCGATGAGGCTGTCGCCTACGGTGCTGCCGTCCAGGCCGCTATCCTGTCTGGCTAC 346490 Query 552269 AACTGATGAAAAACTACAA--AATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGT 552326 |||| | || || | | ||| | || | ||||| | ||||| ||||||||| Sbjct 346491 AACTCTC---AGACCACCAGCAGCATTCTGCTGCTCGATGTCGCCCCTCTCTCTCTTGGT 346547 Query 552327 TTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGT 552386 | || || | ||| || || ||||| || |||||| |||| || || ||||| Sbjct 346548 ATTGAGACCGCTGGTGGCATGATGACCAAGCTTATCCCCCGAAACACCACCATTCCCACC 346607 Query 552387 AAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATT 552446 || || || || || ||||| | || || || || ||| |||| || ||| | Sbjct 346608 AAGAAGTCCGAGGTTTTCTCTACTTTCTCCGACAACCAGCCTGGTGTTCTTATCCAAGTC 346667 Query 552447 TTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAA 552506 |||||||| ||| | | ||| || || || || | || || | ||| | | Sbjct 346668 TTTGAAGGTGAACGTCAGCGCACCAAGGACAACAACCTGCTCGGCAAGTTTGAGCTCACT 346727 Query 552507 GGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCC 552566 ||||||||||| ||||| ||||| || || || ||||| || || || ||| |||||||| Sbjct 346728 GGTATTCCTCCCGCTCCCCGTGGTGTTCCCCAGATTGAGGTCACCTTTGATCTCGATGCC 346787 Query 552567 AATGGAATTTTGAATGT 552583 ||||| || |||| || Sbjct 346788 AATGGTATCATGAACGT 346804 >seq7 Length=1070488 Score = 91.5 bits (100), Expect = 1e-12 Identities = 99/129 (77%), Gaps = 2/129 (2%) Strand=Plus/Plus Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCA-AGCTACTAAAGATGCTGGACGTAT 550467 ||||| || || || || ||||| | || || || ||| || || |||||||| | || Sbjct 982009 ACTGTTCCTGCCTACTTCAATGATGCTCAGCGACAGAGC-ACCAAGGATGCTGGTCAGAT 982067 Query 550468 TGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGG 550527 |||||| ||||||||||| ||| || | ||||| || ||||||||||| ||||| || || Sbjct 982068 TGCTGGTCTTAATGTTCTCCGTGTTGTTAATGAGCCCACTGCTGCTGCTCTTGCCTACGG 982127 Query 550528 ACTTGATAA 550536 || || || Sbjct 982128 TCTGGAGAA 982136 >seq1 Length=5053378 Score = 87.8 bits (96), Expect = 1e-11 Identities = 129/180 (72%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 550004 GATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATT 550063 ||||| || || || || || ||||| ||||| |||||| || | || || ||||| Sbjct 1586542 GATTTGGGCACGACCTACAGCTGTGTCGGTGTGATGCAAAAGGGCCACGTCGAGATTATC 1586483 Query 550064 GCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACTGAACAT 550123 || ||||| |||||| ||| |||||| |||||||| | ||||| || || | | Sbjct 1586482 TTGAACGATCAGGGTAACCGAATTACTCCTTCTTATGTCGCCTTCACTGATGAGGAGCGT 1586423 Query 550124 TTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCT-ACCAATACTATTTTTGA 550182 | || ||||| || || || || || ||| | ||||| ||| | | | ||||||||||| Sbjct 1586422 CTTGTCGGTGACGCGGCCAAGTACCAGGCCGCCGGTAACCCTGAACGA-ACTATTTTTGA 1586364 Score = 87.8 bits (96), Expect = 1e-11 Identities = 153/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 || || || ||||| || || ||| || || ||| |||||||||| || |||| Sbjct 1684566 AGTCGCAGGACAAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCGG 1684507 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 || || || || || || ||||| ||||| | || ||||| || ||||| |||||| Sbjct 1684506 CCGTCCTCGAGCTGCTTACCAGCAAAGATAAGACGCTGTTGATCGGGGGGAATGCCTTCT 1684447 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGT 563435 ||||| ||||| ||| ||| || ||||| || || | | || | | ||| | || Sbjct 1684446 TTATCCTGAATCTTTGATTTGACATTGTCAATCGTGTCCGAG-GACTCGACTTCTAACGT 1684388 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | || || ||||| | ||| || ||||| ||||||||| Sbjct 1684387 GATTGTCTTTCCAGTCAAAGTCTTGACGAAGATTTGCATA 1684348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029276591384830