Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metarhizium_20robertsii_20[genbank_20GCA_5F000591435.1_202014-03-17] 367 sequences; 40,317,276 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq1 138 7e-27 seq16 111 1e-18 seq7 87.8 1e-11 >seq1 Length=5053378 Score = 138 bits (152), Expect = 7e-27 Identities = 164/220 (75%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCT-AGAG 480609 |||||||||||| || ||||| || || || || || | |||||| || ||| || | Sbjct 1684798 ACGAAGACGGAGAACGAGATGCAGGGTGCTCTCCTTCTGGATATTATAGTC-GCTGAGGG 1684740 Query 480610 TTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTC 480669 | | ||||| || ||||| |||||||| |||||||| ||||| ||||| ||||| | Sbjct 1684739 TGCGACCGTCTTCCAGCTGCTTGCCAGCAAAGATAAGACGCTGTTGGTCAGGGGGAATGC 1684680 Query 480670 CTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAA 480729 |||||||||||||||||||| |||||| ||||||||||| || | ||| | Sbjct 1684679 CTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTATCGCTGGATTCCACTTCCA 1684620 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || ||||| || || || | |||||| ||||| ||||| Sbjct 1684619 ATGTGATAGTCTTGCCAGTCAAAGTCTTGACGAAGATTTG 1684580 >seq16 Length=511838 Score = 111 bits (122), Expect = 1e-18 Identities = 262/394 (66%), Gaps = 10/394 (3%) Strand=Plus/Plus Query 475793 AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGT--C 475850 ||||| ||||| ||||| || || || ||||| ||||| || ||||| | || || | Sbjct 346431 AATCCCGATGAGGCTGTCGCCTACGGTGCTGCCGTCCAGGCCGCTATCCTGTCTGGCTAC 346490 Query 475851 AA---TCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAG 475907 || |||||| | | | | ||| | || | || || | || || || | | Sbjct 346491 AACTCTCAGACCACCAGC-----AGCATTCTGCTGCTCGATGTCGCCCCTCTCTCTCTTG 346545 Query 475908 GTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCAT 475967 || |||| || | ||| || || ||||| || ||||| | |||| || | || || Sbjct 346546 GTATTGAGACCGCTGGTGGCATGATGACCAAGCTTATCCCCCGAAACACCACCATTCCCA 346605 Query 475968 GCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAA 476027 ||| || || | || || || |||| || || || || | ||| |||||| Sbjct 346606 CCAAGAAGTCCGAGGTTTTCTCTACTTTCTCCGACAACCAGCCTGGTGTTCTTATCCAAG 346665 Query 476028 TCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTG 476087 |||||||||||||| | | ||| || || || ||| || || | ||| | || Sbjct 346666 TCTTTGAAGGTGAACGTCAGCGCACCAAGGACAACAACCTGCTCGGCAAGTTTGAGCTCA 346725 Query 476088 AAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATG 476147 ||||||||||| |||||| | || ||||| || ||||| || || |||||| | |||| Sbjct 346726 CTGGTATTCCTCCCGCTCCCCGTGGTGTTCCCCAGATTGAGGTCACCTTTGATCTCGATG 346785 Query 476148 CAAATGGTATTCTTAATGTTACTGCTTGTGATAA 476181 | |||||||| | || ||| | ||| ||| || Sbjct 346786 CCAATGGTATCATGAACGTTTCCGCTGTTGAGAA 346819 >seq7 Length=1070488 Score = 87.8 bits (96), Expect = 1e-11 Identities = 99/130 (76%), Gaps = 2/130 (2%) Strand=Plus/Plus Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCA-AGCAACTAAAGATGCGGGAAGAAT 474804 |||||||| || || || |||||| |||| || || |||| | || ||||| || || Sbjct 982009 ACTGTTCCTGCCTACTTCAATGATGCTCAGCGACAGAGCACC-AAGGATGCTGGTCAGAT 982067 Query 474805 TGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGG 474864 ||| |||||||||||| | ||| || ||||||| || || || || || ||||| || || Sbjct 982068 TGCTGGTCTTAATGTTCTCCGTGTTGTTAATGAGCCCACTGCTGCTGCTCTTGCCTACGG 982127 Query 474865 TCTTGATAAG 474874 ||| || ||| Sbjct 982128 TCTGGAGAAG 982137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268163457589316