Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metarhizium_20robertsii_20[genbank_20GCA_5F000591435.1_202014-03-17] 367 sequences; 40,317,276 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq1 104 4e-17 >seq1 Length=5053378 Score = 104 bits (114), Expect = 4e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | |||||| | || | || | ||||| ||| || ||| || ||||| Sbjct 1684578 ATACCACCACGAAGTCGCAGGACAAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAATCA 1684519 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | ||| |||| || | || ||||||||||| || | | |||||| || || Sbjct 1684518 GACAGCGTTCGGCCGTCCTCGAGCTGCTTACCAGCAAAGATAAGACGCTGTTGATCGGGG 1684459 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||||||||| || || || ||| ||||| || || || || || || Sbjct 1684458 GGAATGCCTTCTTTATCCTGAATCTTTGATTTGACATTGTCAATCGTGTCCGAGGACTCG 1684399 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||||| || || || || ||||| || || || | ||| || ||||| Sbjct 1684398 ACTTCTAACGTGATTGTCTTTCCAGTCAAAGTCTTGACGAAGATTTGCAT 1684349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905131847688600