Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metarhizium_20robertsii_20[genbank_20GCA_5F000591435.1_202014-03-17] 367 sequences; 40,317,276 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq60 136 5e-26 seq30 136 5e-26 seq2 134 2e-25 seq3 93.3 5e-13 seq4 91.5 2e-12 >seq60 Length=103556 Score = 136 bits (150), Expect = 5e-26 Identities = 226/321 (70%), Gaps = 8/321 (2%) Strand=Plus/Minus Query 92616 GTGAGGGCCTCCTGCACCTGGAAGCGGTCGGAAAACATGTCGACGATGCGCGGGATCTTG 92675 |||||| |||||| | ||| | |||| | |||||| ||| ||||||| || | |||| Sbjct 43340 GTGAGGCGCTCCTGGATCTGCAGGCGGCGCGCAAACATCTCGGCGATGCGGGGCAGCTTG 43281 Query 92676 CTCAGGCCGATGATCCTGCCCGTGGGCAGGTAGCCCACGTGGGCCTTGCCCATAAAGGGC 92735 | |||||||| | | || | |||||| | ||| ||||||| |||||||| Sbjct 43280 GAGATGCCGATGACGGCGTTGTTCGGGATGTAGCCAATGTGCATCTTGCCCGTAAAGGGC 43221 Query 92736 AGCAGATGGTGCTCGCACATGGAGAAAAAGTCGACGTCGCGCACGATCACCATCTCGCCC 92795 | ||| ||||||||||| | ||| | | ||||||||| || || ||||||||| Sbjct 43220 ACCAGGTGGTGCTCGCAGACCGAGTAGACGTCGACGTCCTTGACAATGACCATCTCGGAG 43161 Query 92796 GAGGCCTCGGCAAAGA--GCGC-GTCGCCGATGGCCTCGGCCAGCGTCATGCG-GTGGCC 92851 | |||| |||| |||| || | | ||| ||| || ||| ||| || ||| Sbjct 43160 TGGCCCTCCTGGAAGATGGCGCCGTTGACAATG---TCGAGCA-CGTTTTGCTCGTAGCC 43105 Query 92852 GCGCGTGCGCTCCACCATGGCCTTGGCCACGCGCATCGGCGTGTCCAGGAGGCCCTCGCG 92911 |||||| | || |||||||||||| |||| ||||||| |||||||||||||||| Sbjct 43104 GCGCGTAAAGTACAGCATGGCCTTGGCGTAGCGCTCCGGCGTGGCCAGGAGGCCCTCGCG 43045 Query 92912 CCGCACGTCCTCGCCCAGGCA 92932 | ||| |||||||| ||| Sbjct 43044 GTCCGCGTTCTCGCCCACGCA 43024 >seq30 Length=309456 Score = 136 bits (150), Expect = 5e-26 Identities = 218/313 (70%), Gaps = 0/313 (0%) Strand=Plus/Minus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 |||||| || || | || |||| ||| || || ||||||||||| | || ||||||||| Sbjct 47452 CTGGTCAACATATCTGGCAGTGTTGTTGAACACACGGAGCATGGGAATGATGCCGTTGGA 47393 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 ||||||||| || || | ||| | ||| | ||| || | ||| | | || Sbjct 47392 GGTGCCGTTGGTACCAGCAATGTAAGAGCCAGTGGCACGAATGCGGTGGACATTGAGACC 47333 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 |||||| |||||| |||||| || | || || ||||| |||||||||||||| || Sbjct 47332 GATGCCACCGGCCATCTTGGAAATCATGGCACAAGTCTTGAGAGTGTCGTAGATGCCGTC 47273 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 ||| ||| ||||||||||||| || |||||||| || || | || | || || Sbjct 47272 GATACTGTCATCCTTCATGTCCACAAGGAAGCACGAAGAAAGCTGGGCTTGAGGAGTACC 47213 Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364 || |||||||| || || | || |||||| || | | |||||| || |||||| Sbjct 47212 AGCATTGAAGAGTGTAGGTGAGGCATGGGTGAAGAATTTGCTTGACATGAGGTTGTAGGT 47153 Query 1630365 GGCGAGCACGCGC 1630377 | | |||||| Sbjct 47152 TTCAATGACGCGC 47140 Score = 89.7 bits (98), Expect = 6e-12 Identities = 114/155 (74%), Gaps = 4/155 (3%) Strand=Plus/Minus Query 1628448 CATAAAGAGGTCACACGTCCACAGTGC--GTAAAAGAGGTCGCGCGCCCGGTTCTCCTCC 1628505 ||| |||||||| |||| || || | |||||| || || || ||| |||||| Sbjct 47605 CATGAAGAGGTCGGGAATCCAGAGGGCAAGGAAAAGA--TCACGAGCACGGACTTCCTCC 47548 Query 1628506 TTGCCGTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGG 1628565 ||||||||||| ||| |||| ||||| | |||| || || |||||||| ||||||||| Sbjct 47547 TTGCCGTGGTTTTTTCTGAGATCGAGGAACTCGAAAACATCAGCGTGCCAAGGCTCCAGG 47488 Query 1628566 TAGCAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 1628600 ||| |||||||| || |||||| ||| || Sbjct 47487 TAGATTGCAAAGGCACCGGGACGCTTGTTGCCACC 47453 >seq2 Length=4734625 Score = 134 bits (148), Expect = 2e-25 Identities = 95/109 (87%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || ||||||||||| ||||||||||| ||||| ||| | || || ||| ||||||||||| Sbjct 1142877 GCTGCCAACTACCTTGACATCAAGCCGCTGCTTGATGTCGGCTGTAAGACTGTGGCCAAC 1142936 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCA 1592294 ||||||||||| ||||| || ||||||||||||||||| || ||||||| Sbjct 1142937 ATGATCAAGGGGAAGTCACCAGAGGAGATCCGCAAGACTTTCAACATCA 1142985 >seq3 Length=2231953 Score = 93.3 bits (102), Expect = 5e-13 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 18358 CCGCGGCCCTCACACGCCGACTACACCTACATGGCCAAGTACGGCATCAAGGCGTCGTCG 18417 ||||| ||||| |||||||||| || ||| | | ||||| || | |||||| || || Sbjct 820006 CCGCGCCCCTCCCACGCCGACTGGACTTACCTTGAGAAGTATGGTACCAAGGCCTCCTCT 819947 Query 18418 GGCGGAGGCCGGTCGTCTGCCCGCGAGACCCTCATGCGCGTCGCCGCCGGCGCGGTCGCC 18477 ||||| || ||| |||||||| || | ||||||||||||||||| || ||| Sbjct 819946 GGCGGCGGTCGGAGCAGCGCCCGCGAAACTATTGCCCGCGTCGCCGCCGGCGCTGTTGCC 819887 Query 18478 GAGAAATGGCT 18488 ||||||||||| Sbjct 819886 GAGAAATGGCT 819876 Score = 93.3 bits (102), Expect = 5e-13 Identities = 162/230 (70%), Gaps = 18/230 (8%) Strand=Plus/Plus Query 869148 ATGCAGG--GACGGCAAAGAGGGCACTATGCGAACCTTCGTCGCGACTGATCATTTCGTT 869205 ||||||| | ||||||| || | ||| ||| || || ||| ||| | ||||| Sbjct 1241920 ATGCAGGAGGCAGGCAAAGT---CAGTGTGCAGACCCTCATCACGAGAGATGAGCTCGTT 1241976 Query 869206 GCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCGCAGAAACT 869265 | |||| || || |||||||||||||||||||| ||||| ||||| | | ||| | Sbjct 1241977 GGAGAAGGTCAGACCTGGCATGAGGCCGCGCTTCTTCAGCCAGAAGATAGAGGCGAA--T 1242034 Query 869266 GCCCGA--GAAAAAGATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGCAAAGGTG 869323 || | | ||| ||||||||||| || || || || ||| ||| |||| || ||||| Sbjct 1242035 GCACCACTGAAGAAGATGCCCTCAACAGCAGCGAACGCGACGAGACGCTGAGCGAAGGT- 1242093 Query 869324 TCGAGGCCCTCCTTG---TTGATCCACTTCATCGCCCAGTCGGCCTTTTT 869370 || ||||||| | |||||| || |||||||||||||| || Sbjct 1242094 ---AG--ACTCCTTGTCCTGGATCCATCGGATGGCCCAGTCGGCCTTCTT 1242138 >seq4 Length=2042541 Score = 91.5 bits (100), Expect = 2e-12 Identities = 92/120 (77%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 344182 GTGGCCTTCCCCACCGAGACCGTCTACGGCCTCGGCGCCGACGCCACGTCTGACGAGGCC 344241 || ||||||||||| ||||| || |||||||||||||||||||||||| || | || Sbjct 1175290 GTCGCCTTCCCCACGGAGACGGTGTACGGCCTCGGCGCCGACGCCACGAGGAGCGCGTCC 1175349 Query 344242 GTGCGGCGCATCTTTGAGGTCAAGGGCCGACCCTCCAACAACCCGATCATTGTGCACGTG 344301 || | |||||| | || ||||| | || || |||||||| |||| ||||||||| Sbjct 1175350 GTCAAGGGCATCTATTCGGCAAAGGGGAGGCCGTCGGACAACCCGCTCATCGTGCACGTG 1175409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107109082261339