Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metarhizium_20robertsii_20[genbank_20GCA_5F000591435.1_202014-03-17]
367 sequences; 40,317,276 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq10 89.7 4e-13
seq1 82.4 6e-11
>seq10
Length=656475
Score = 89.7 bits (98), Expect = 4e-13
Identities = 108/147 (73%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| ||||| |||||||||||| | ||||||| ||||| ||||| ||||||||||| ||
Sbjct 567949 ATCCTCGAGCTGTTTGCCAGCAAAGATCAATCGCTGCTGGTCCGGGGGAATACCCTCCTT 568008
Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
||| || | || |||||| | || | || || || || || ||||| || ||
Sbjct 568009 GTCCTGGATCTTGGACTTGACATTGTCGATCGTATCGGAGGACTCGACCTCAAGGGTAAT 568068
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAA 29777
|| ||||| || | ||| || |||||
Sbjct 568069 GGTCTTGCCCGTCAGGGTCTTCACAAA 568095
>seq1
Length=5053378
Score = 82.4 bits (90), Expect = 6e-11
Identities = 149/218 (68%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631
||||||||||| || || ||| || || || ||||| || || | |||||| |
Sbjct 3941191 CGCAGCACCAAGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA 3941250
Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691
|| ||||| || || ||||| | || | || || || || || || || ||||| |||
Sbjct 3941251 TCCTCGAGCTGCTTACCAGCGAAGATGAGTCGCTGTTGGTCGGGGGGGATGCCCTCCTTG 3941310
Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751
|| || | || ||||| | || | ||||| ||| || || ||||| || |||
Sbjct 3941311 TCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATA 3941370
Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
|| || || || | ||| || || || |||||||| ||
Sbjct 3941371 GTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTT 3941408
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385217476986747
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |