Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metarhizium_20robertsii_20[genbank_20GCA_5F000591435.1_202014-03-17] 367 sequences; 40,317,276 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq16 107 1e-17 seq7 95.1 9e-14 seq6 93.3 3e-13 >seq16 Length=511838 Score = 107 bits (118), Expect = 1e-17 Identities = 246/367 (67%), Gaps = 4/367 (1%) Strand=Plus/Minus Query 281441 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 281500 |||||||||||||| | |||||| ||||| ||||| || || || || | |||| || Sbjct 346795 ATACCATTGGCATCGAGATCAAAGGTGACCTCAATCTGGGGAACACCACGGGGAGCGGGA 346736 Query 281501 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 281560 || || || | | ||| | || || || || || || ||| | |||||| Sbjct 346735 GGAATACCAGTGAGCTCAAACTTGCCGAGCAGGTTGTTGTCCTTGGTGCGCTGACGTTCA 346676 Query 281561 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 281620 || || || | ||||||| ||| ||| || || || || |||| | || || | Sbjct 346675 CCTTCAAAGACTTGGATAAGAACACCAGGCTGGTTGTCGGAGAAAGTAGAGAAAACCTCG 346616 Query 281621 GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGCT 281680 || || || ||||| || ||||||| |||| |||||||| || |||||||| Sbjct 346615 GACTTCTTGGTGGGAATGGTGGTGTTTCGGGGGATAAGCTTGGTCATCATGCCACCAGCG 346556 Query 281681 GTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAAT-ATTTTGAAGTTTTTC 281739 || || | ||||||||| ||||| | |||||| | || | ||| | || || | Sbjct 346555 GTCTCAATACCAAGAGAGAGAGGGGCGACATCGAGCAGCAGAATGCTGCTG--GTGGTCT 346498 Query 281740 ATCAGTT-TGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCAT 281798 |||| | ||| || ||||| || || | |||||||| || || ||||| |||| Sbjct 346497 GAGAGTTGTAGCCAGACAGGATAGCGGCCTGGACGGCAGCACCGTAGGCGACAGCCTCAT 346438 Query 281799 CAGGATT 281805 | ||||| Sbjct 346437 CGGGATT 346431 >seq7 Length=1070488 Score = 95.1 bits (104), Expect = 9e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 282335 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 282394 || || ||||| || |||| |||||||||||| || ||||||| || | | ||||||| Sbjct 982136 TTCTCCAGACCGTAGGCAAGAGCAGCAGCAGTGGGCTCATTAACAACACGGAGAACATTA 982077 Query 282395 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 282454 ||||||||||| || ||||| || ||| |||| || | ||| || || || ||| Sbjct 982076 AGACCAGCAATCTGACCAGCATCCTTGGTGCTCTGTCGCTGAGCATCATTGAAGTAGGCA 982017 Query 282455 GGAACAGTAATAACGGC 282471 |||||||| | ||| || Sbjct 982016 GGAACAGTGACAACAGC 982000 >seq6 Length=1086324 Score = 93.3 bits (102), Expect = 3e-13 Identities = 120/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 432288 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACGT 432347 ||||||||||| || | ||||| || |||||||| |||||||| ||| | ||||| ||| Sbjct 314980 GGTAAAGAAGGCCGCTTGAGAGGTAACTTGATGGGCAAGCGTGTGGATTTCTCTGCGCGT 315039 Query 432348 ACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTCATTATT 432407 || || || ||| ||| | || | |||| | ||||| || ||||||| || ||| Sbjct 315040 ACTGTCATCACTGGTGACGCCAACCTGTCTCTTCACGAAGTCGGCGTTCCTCGCAGCATT 315099 Query 432408 GCGAAAAATCTTACTTTTGACGAAATTGTAACAGAACATAATATTG 432453 || | || ||| || | | ||||| || ||| ||||||||| Sbjct 315100 GCCAGAACTCTCACCTATCCCGAAACAGTCACACCTTATAATATTG 315145 Score = 86.0 bits (94), Expect = 5e-11 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 435118 GGTCTTGGACCTTTTGAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTAAT 435177 ||||| ||| | |||||| ||||| || | ||||||||| | |||||| | ||| || Sbjct 316405 GGTCTCACACCCTCTGAATTCTTCTTTCACGCCATGGCTGGTAGAGAAGGTCTCATTGAT 316464 Query 435178 ACAGCTATTAAAACTGCTGATACTGGTTATATTCAAAGAAAACTTGTCAAGATGCTTGAA 435237 || ||| | || ||||| || || ||||||||||| || |||||| ||| |||||| Sbjct 316465 ACTGCTGTCAAGACTGCAGAGACAGGTTATATTCAGCGACGACTTGTGAAGGCCCTTGAA 316524 Query 435238 GA 435239 || Sbjct 316525 GA 316526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740612381850942