Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metarhizium_20robertsii_20[genbank_20GCA_5F000591435.1_202014-03-17]
367 sequences; 40,317,276 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq1 158 2e-33
seq10 89.7 1e-12
>seq1
Length=5053378
Score = 158 bits (174), Expect = 2e-33
Identities = 164/215 (76%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
||||| || | ||| |||||||| || ||||| || || |||||||| || ||| |||
Sbjct 1684563 CGCAGGACAAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCGGCCG 1684504
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
|| || || || || ||||||||||| || | |||||||| || || || ||||| |||
Sbjct 1684503 TCCTCGAGCTGCTTACCAGCAAAGATAAGACGCTGTTGATCGGGGGGAATGCCTTCTTTA 1684444
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
|| |||||||||| ||| ||||| |||||||| || | || ||||| || || ||
Sbjct 1684443 TCCTGAATCTTTGATTTGACATTGTCAATCGTGTCCGAGGACTCGACTTCTAACGTGATT 1684384
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| || ||||| ||||| || || || |||||
Sbjct 1684383 GTCTTTCCAGTCAAAGTCTTGACGAAGATTTGCAT 1684349
Score = 150 bits (166), Expect = 4e-31
Identities = 163/216 (75%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| ||||| | ||||| || || ||||| |||||||| || || | | |||
Sbjct 1684792 ACGGAGAACGAGATGCAGGGTGCTCTCCTTCTGGATATTATAGTCGCTGAGGGTGCGACC 1684733
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
|||||| || || || ||||||||||| || | ||||| || || || || ||||||||
Sbjct 1684732 GTCTTCCAGCTGCTTGCCAGCAAAGATAAGACGCTGTTGGTCAGGGGGAATGCCTTCCTT 1684673
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774
||||||||||||| || ||||| ||||| ||||| | | ||| |||||||| || ||
Sbjct 1684672 GTCTTGAATCTTTGACTTGACATTGTCAATAGTATCGCTGGATTCCACTTCCAATGTGAT 1684613
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||||| ||||| ||||| || || || |||||
Sbjct 1684612 AGTCTTGCCAGTCAAAGTCTTGACGAAGATTTGCAT 1684577
>seq10
Length=656475
Score = 89.7 bits (98), Expect = 1e-12
Identities = 127/179 (71%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 82623 TTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATT 82682
||||| || || || || || | | ||| || || || || ||||| |||||||||||
Sbjct 567917 TTCTGGATGTTGTAGTCGGACAAAGTTCGGCCATCCTCGAGCTGTTTGCCAGCAAAGATC 567976
Query 82683 AGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCA 82742
| || || || || || || || || ||||| || || ||||| | || ||||| ||
Sbjct 567977 AATCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 568036
Query 82743 ATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAA 82801
|||||||| | || || || | || || |||||||| |||| ||||| |||||
Sbjct 568037 ATCGTATCGGAGGACTCGACCTCAAGGGTAATGGTCTTGCCCGTCAGGGTCTTCACAAA 568095
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981822583264413
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |