Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metarhizium_20robertsii_20[genbank_20GCA_5F000591435.1_202014-03-17] 367 sequences; 40,317,276 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq1 158 2e-33 seq10 89.7 1e-12 >seq1 Length=5053378 Score = 158 bits (174), Expect = 2e-33 Identities = 164/215 (76%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 ||||| || | ||| |||||||| || ||||| || || |||||||| || ||| ||| Sbjct 1684563 CGCAGGACAAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCGGCCG 1684504 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 || || || || || ||||||||||| || | |||||||| || || || ||||| ||| Sbjct 1684503 TCCTCGAGCTGCTTACCAGCAAAGATAAGACGCTGTTGATCGGGGGGAATGCCTTCTTTA 1684444 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 || |||||||||| ||| ||||| |||||||| || | || ||||| || || || Sbjct 1684443 TCCTGAATCTTTGATTTGACATTGTCAATCGTGTCCGAGGACTCGACTTCTAACGTGATT 1684384 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| || ||||| ||||| || || || ||||| Sbjct 1684383 GTCTTTCCAGTCAAAGTCTTGACGAAGATTTGCAT 1684349 Score = 150 bits (166), Expect = 4e-31 Identities = 163/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| ||||| | ||||| || || ||||| |||||||| || || | | ||| Sbjct 1684792 ACGGAGAACGAGATGCAGGGTGCTCTCCTTCTGGATATTATAGTCGCTGAGGGTGCGACC 1684733 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 |||||| || || || ||||||||||| || | ||||| || || || || |||||||| Sbjct 1684732 GTCTTCCAGCTGCTTGCCAGCAAAGATAAGACGCTGTTGGTCAGGGGGAATGCCTTCCTT 1684673 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 ||||||||||||| || ||||| ||||| ||||| | | ||| |||||||| || || Sbjct 1684672 GTCTTGAATCTTTGACTTGACATTGTCAATAGTATCGCTGGATTCCACTTCCAATGTGAT 1684613 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||| ||||| ||||| || || || ||||| Sbjct 1684612 AGTCTTGCCAGTCAAAGTCTTGACGAAGATTTGCAT 1684577 >seq10 Length=656475 Score = 89.7 bits (98), Expect = 1e-12 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 82623 TTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATT 82682 ||||| || || || || || | | ||| || || || || ||||| ||||||||||| Sbjct 567917 TTCTGGATGTTGTAGTCGGACAAAGTTCGGCCATCCTCGAGCTGTTTGCCAGCAAAGATC 567976 Query 82683 AGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCA 82742 | || || || || || || || || ||||| || || ||||| | || ||||| || Sbjct 567977 AATCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 568036 Query 82743 ATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAA 82801 |||||||| | || || || | || || |||||||| |||| ||||| ||||| Sbjct 568037 ATCGTATCGGAGGACTCGACCTCAAGGGTAATGGTCTTGCCCGTCAGGGTCTTCACAAA 568095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981822583264413