Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metarhizium_20robertsii_20[genbank_20GCA_5F000591435.1_202014-03-17] 367 sequences; 40,317,276 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq30 203 4e-47 >seq30 Length=309456 Score = 203 bits (224), Expect = 4e-47 Identities = 629/963 (65%), Gaps = 24/963 (2%) Strand=Plus/Minus Query 69267 CAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTTGCATATTGTATTAT 69326 ||| |||| ||| || || || || || || ||||| | || | |||| | || Sbjct 47941 CAGAGCTAGAGAGGCAAGGTTGCAGACAGCCACCTCGTCAGGGGCAGAGTATTCAACAAT 47882 Query 69327 CTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTT 69386 ||| || || || ||| | ||| || || || || | ||| || ||||| ||||| Sbjct 47881 CTCAGTGCAAAGGTTAGAGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTCTTGTT 47822 Query 69387 ACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGA 69446 ||||| |||||||| || || || ||| ||||||| || |||||| || | || || Sbjct 47821 GCAGGCATCCTTGTAGAGCATGAAGGGATTACCAGTCTCGGTCTGAGCCTCAAGGATGGA 47762 Query 69447 TTTCCAAACGACCCTAGCATTTATTACGGTCTTGTAACGCTT---CTCTTTTTCATATTG 69503 | ||| | | ||| || |||| | | ||| |||| || || | Sbjct 47761 GTACCAGAGCTTCTGAGCCCGAAT---GGTCCTACGGCCCTTGCCCTCTCGCTCGTACTT 47705 Query 69504 T--GTATATAGCCGTTCGAATTCATCTCCCCAAA-CA-TCATCCAATCCAGGACATTCAT 69559 | ||| | |||| ||||| || ||| ||| | || || | | ||||| ||||| | Sbjct 47704 TTCGTACAGAGCC--TCGAACTC--CTCACCATAGCAGTCGGCAAGGCCAGGGCATTCGT 47649 Query 69560 TTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAA 69619 | |||||||||| | ||| | | | | || || || ||||| || || ||||||| Sbjct 47648 TGGGACACATCAGAGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGGTCGGGAA 47589 Query 69620 TCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAA 69679 |||| || || | || ||||| | | | ||| || || || |||||| | | Sbjct 47588 TCCAGAGGGCAAGGAAAAGATCACGAGCACGGACTTCCTCCTTGCCGTGGTTTTTTCTGA 47529 Query 69680 GATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCG 69739 ||||||| ||||| | || ||||| ||||| || || || || || || | | | || | Sbjct 47528 GATCGAGGAACTCGAAAACATCAGCGTGCCAAGGCTCCAGGTAGATTGCAAAGGCACCGG 47469 Query 69740 GTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCG 69799 | || || || || ||||| || | |||||||||||||| || | || | ||||| | Sbjct 47468 GACGCTTGTTGCCACCCTGGTCAACATATCTGGCAGTGTTGTTGAACACACGGAGCATGG 47409 Query 69800 GAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATAT 69859 |||| || || || || | || || || |||| ||| ||| || | || ||||| Sbjct 47408 GAATGATGCCGTTGGAGGTGCCGTTGGTACCAGCAATGTAAGAGCCAGTGGCACGAATGC 47349 Query 69860 TACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATG 69919 | | ||||| || || || ||||| || || || | |||||| || | | Sbjct 47348 GGTGGACATTGAGACCGATGCCACCGGCCATCTTGGAAATCATGGCACAAGTCTTGAGAG 47289 Query 69920 TGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTT 69979 |||| || || || || || || ||||| |||||| | ||| || || ||| | | Sbjct 47288 TGTCGTAGATGCCGTCGATACTGTCATCCTTCATGTCCACAAGGAAGCACGAAGAAAGCT 47229 Query 69980 GATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAG 70039 | || ||| || ||||| || | |||||| || || || ||||| |||| | Sbjct 47228 GGGCTTGAGGAGTACCAGCATTGAAGAGTGTAGGTGAGGCATGGGTGAAGAATTTGCTTG 47169 Query 70040 AAAGCAGATTGTATGTTTCAAT----AGCTGATTCTATATC-CCACTGATGAATTCCTAT 70094 | | || ||||| |||||||| ||| | | | | || || | | || || | Sbjct 47168 ACATGAGGTTGTAGGTTTCAATGACGCGCTCAATGT-TGTCTCCCCAG----ATACCGAC 47114 Query 70095 CGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAG 70154 || |||||||| | |||||| ||||||||||| || | ||| || | |||| || Sbjct 47113 AGCAACACGCATAATCATATGTTGAGGTCGTTCAACGATCTTACCGTTGAGCTTCAGAAG 47054 Query 70155 GTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAAT 70214 |||||| ||||| || || || |||||||| | ||| ||||| || ||||| | Sbjct 47053 ATATGATCGCTCCAGGGTCTTGAAGCCAAAATACTGGTAGTTGAAGTCCCTGTCGTAGAC 46994 Query 70215 AAT 70217 ||| Sbjct 46993 AAT 46991 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686905648805880