Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metarhizium_20robertsii_20[genbank_20GCA_5F000591435.1_202014-03-17] 367 sequences; 40,317,276 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq1 95.1 1e-14 >seq1 Length=5053378 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || |||| |||| ||||| || | || || || || || |||||||||||| Sbjct 3941179 CCACCACGCAGGCGCAGCACCAAGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 3941238 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | |||| | || |||||||| ||||| ||| | ||||| |||||||| || || || Sbjct 3941239 AGGGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAGATGAGTCGCTGTTGGTCGGGGGGG 3941298 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| || || ||||||| || | | | || | ||||| | | || || Sbjct 3941299 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 3941358 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || |||| || ||||| || || || || || || ||||| Sbjct 3941359 TCAAGGGTGATAGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 3941405 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 ||||| || || ||||| ||||| || || | || |||| |||||||| ||||| Sbjct 1684545 GTAGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCGGCCGTCCTCGAGCTGCTTACCA 1684486 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || | || |||||||||||||| || || | || |||||||| ||||| ||| Sbjct 1684485 GCAAAGATAAGACGCTGTTGATCGGGGGGAATGCCTTCTTTATCCTGAATCTTTGATTTG 1684426 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | ||||| | || || ||||||| || || | || || |||| ||| Sbjct 1684425 ACATTGTCAATCGTGTCCGAGGACTCGACTTCTAACGTGATTGTCTTTCCAGTCAAAGTC 1684366 Query 27231 TTCACAAAGATTTGCATA 27248 || || |||||||||||| Sbjct 1684365 TTGACGAAGATTTGCATA 1684348 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 27057 TCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116 || || || ||||| |||||||| | | |||| ||||||| ||||| || || || | Sbjct 1684767 TCCTTCTGGATATTATAGTCGCTGAGGGTGCGACCGTCTTCCAGCTGCTTGCCAGCAAAG 1684708 Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176 || ||||||||||| || || || | || || || || ||||| || | | Sbjct 1684707 ATAAGACGCTGTTGGTCAGGGGGAATGCCTTCCTTGTCTTGAATCTTTGACTTGACATTG 1684648 Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236 || | ||| || ||| ||| ||||| | || |||| ||||| |||| ||| || || Sbjct 1684647 TCAATAGTATCGCTGGATTCCACTTCCAATGTGATAGTCTTGCCAGTCAAAGTCTTGACG 1684588 Query 27237 AAGATTTGCATA 27248 |||||||||||| Sbjct 1684587 AAGATTTGCATA 1684576 Score = 84.2 bits (92), Expect = 2e-11 Identities = 115/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 || || ||||| || || ||| |||| | |||||||| || ||||| | |||||| || Sbjct 1683974 TCCTCAAGCTGCTTGCCAGCGAAAATTAAGCGCTGTTGGTCAGGCGGGATACCCTCCTTG 1683915 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||||| || | | || | ||||| | | || || || ||||| || Sbjct 1683914 TCCTGAATCTTCGACTTAACATTGTCGATGGTGTCGGACGACTCGACCTCAAGAGTGATG 1683855 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGC 27253 | |||||||| |||||||| |||||||||||||| ||||| Sbjct 1683854 GTCTTGCCCGTGAGAGTTTTGACAAAGATTTGCATGGCTGC 1683814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424932499348104