Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metarhizium_20robertsii_20[genbank_20GCA_5F000591435.1_202014-03-17] 367 sequences; 40,317,276 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq30 219 5e-52 seq2 104 3e-17 >seq30 Length=309456 Score = 219 bits (242), Expect = 5e-52 Identities = 511/759 (67%), Gaps = 20/759 (3%) Strand=Plus/Plus Query 53195 ATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACGAC 53254 ||||| || || | |||||| || ||| || ||| ||| ||| || ||| || Sbjct 47102 ATGCGTGTTGCTGTCGGTATCTGGGGAGACAACATTGAGCGCGTCATTGAAACCTACAAC 47161 Query 53255 TTAATGAGCCAA--AAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGA 53312 | ||| ||| || | ||| || || ||| | || || || ||||| |||||||| Sbjct 47162 CTCATGT--CAAGCAAATTCTTCACCCATGCCTCACCTACACTCTTCAATGCTGGTACTC 47219 Query 53313 ATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCA 53372 ||| | ||| | || |||||||| |||| |||||||||||| |||||||||| Sbjct 47220 CTCAAGCCCAGCTTTCTTCGTGCTTCCTTGTGGACATGAAGGATGACAGTATCGACGGCA 47279 Query 53373 TCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCC 53432 ||||||| || |||||| |||||| || |||||| | | ||||| |||||| | | Sbjct 47280 TCTACGACACTCTCAAGACTTGTGCCATGATTTCCAAGATGGCCGGTGGCATCGGTCT-C 47338 Query 53433 ACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGA 53490 | || || | || | ||||| | ||| | || || || |||||| | || | Sbjct 47339 AATG-TCCACCGCATTCGTGCCACTGGCTCTTACATTGCTGGTACCAACGGCACCTCCAA 47397 Query 53491 TGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGG 53550 || ||| | || |||||||| || ||||||||||| ||| | || || |||||||||| Sbjct 47398 CGGCATCATTCCCATGCTCCGTGTGTTCAACAACACTGCCAGATATGTTGACCAGGGTGG 47457 Query 53551 TGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGA 53610 ||||| || | || || |||||||| ||||| |||||||| || || | || Sbjct 47458 CAACAAGCGTCCCGGTGCCTTTGCAATCTACCTGGAGCCTTGGCACGCTGATGTTTTCGA 47517 Query 53611 GTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTTTA 53669 ||| ||||| || | || || || | || || | || ||| ||||| || || Sbjct 47518 GTTCCTCGATCTCAGAAAAAACCACGGCAAGGAGGAAGTCCG-TGCTCGTGATCTTTTCC 47576 Query 53670 CAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACC 53729 || || |||||||| |||||||||||| | || |||||| ||| || ||| | Sbjct 47577 TTGCCCTCTGGATTCCCGACCTCTTCATGAAGCGTGTCGAGAAGAACGGCGACTGGACTC 47636 Query 53730 TGATGTGCCCGAACGAGTGCCCCGGCC-TCCAGGGTGTCTACGGTGAGGAGTTTAACGAG 53788 ||||||| || ||||| ||||| |||| | | | || ||| ||||||||||| | | Sbjct 47637 TGATGTGTCCCAACGAATGCCCTGGCCTTGCCGACTG-CTATGGTGAGGAGTTCGAGGCT 47695 Query 53789 ATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAA----GGCGCGTGA 53844 |||| | ||||| ||||| | | | ||| | | ||| | | Sbjct 47696 CTGTACGAAAAGTACGAGCGAGAGGGC----AAGGGCCGTAGGACCATTCGGGCTCAGAA 47751 Query 53845 GGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAA 53904 | | ||| | | ||||| || ||| ||||| || | || | |||| |||||| Sbjct 47752 GCTCTGGTACTCCATCCTTGAGGCTCAGACCGAGACTGGTAATCCCTTCATGCTCTACAA 47811 Query 53905 GGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGG 53943 |||| | |||| |||||||||||||||||||| |||| Sbjct 47812 GGATGCCTGCAACAAGAAGAGCAACCAGAAGAACCTCGG 47850 Score = 114 bits (126), Expect = 1e-20 Identities = 145/197 (74%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 55728 TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGA-AGAGTCTGATTGACATGAGT 55786 |||||| | ||| ||| || ||||||||| | ||| | || || | | ||| Sbjct 48618 TCAAGGCTCTCTACAAGACTGTCTGGGAGATTTCTCAGCGACAGGTTG-TCCAGATGGCC 48676 Query 55787 GCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCT 55846 || || |||||||| | ||| ||||||||||||||||| || ||| |||| || | ||| Sbjct 48677 GCCGACCGTGGTGCCTTCATTGACCAGTCCCAGTCTCTCAATATCCACATGAAGGACCCT 48736 Query 55847 TCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGT 55906 ||| ||| |||| | | | ||||||||| ||||||||| ||| |||||||| || Sbjct 48737 TCAATGGGCAAGATCACCAGCATGCACTTTGCCGGGTGGAAACTGGGTCTCAAGACTGGC 48796 Query 55907 ATGTACTATCTGCGGAC 55923 |||||||| ||||| || Sbjct 48797 ATGTACTACCTGCGCAC 48813 >seq2 Length=4734625 Score = 104 bits (114), Expect = 3e-17 Identities = 203/298 (68%), Gaps = 4/298 (1%) Strand=Plus/Minus Query 117275 AATATGTTCTTGGTCCACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCAGCATCC 117334 || || ||||| | | || |||| || || || ||||||| | || |||||||| Sbjct 3852134 AAGATCTTCTTTGCAAATGGAGCTAATCGCGTAAAGGTGTAACGGGGACTGGCAGCATCG 3852075 Query 117335 TTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGTTGTTG 117394 |||||||||||||| | ||| || | || || || |||| || ||| | |||||| Sbjct 3852074 GAACCACCAGCAAGACGAGAACCAAAGTTACCGCTAGGTTCCAGGATGTTGATATTGTTG 3852015 Query 117395 GCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTCACCATGG 117454 | ||| |||||||| || ||||| | || || ||| | | || ||||||||| Sbjct 3852014 GAGCCGACAAAGTTCTGCGCCAAACCAATGATAGTCTGTTGCAAGGAAGCTTCACCATGG 3851955 Query 117455 TGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATGTC--TGACG 117512 || |||||||| ||||| | || || || || || | | |||||| | || ||| Sbjct 3851954 TGGTACGCCGTGTGCTCAGAGACATAACCAGCAAGTTCCACAACCTTCTTATCCTTGA-- 3851897 Query 117513 TCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCAGACCATC 117570 ||||||| || | || || || | ||||| || || | ||||| | |||||| Sbjct 3851896 TCAGGTTTCGTTTAAAACACGCGTATAGAACCTTTCGTTGTCCGGGCTTTAAACCATC 3851839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547213489646600