Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metarhizium_20robertsii_20[genbank_20GCA_5F000591435.1_202014-03-17]
367 sequences; 40,317,276 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq1 114 1e-20
>seq1
Length=5053378
Score = 114 bits (126), Expect = 1e-20
Identities = 150/205 (73%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 39081 ATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTG 39140
||| || |||||||| || || |||||||| ||| || || || |||| || |||||
Sbjct 1684780 ATGCAGGGTGCTCTCCTTCTGGATATTATAGTCGCTGAGGGTGCGACCGTCTTCCAGCTG 1684721
Query 39141 TTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTT 39200
||||| ||||| ||||||||||| ||||| | ||| | || || |||| | ||| | |
Sbjct 1684720 CTTGCCAGCAAAGATAAGACGCTGTTGGTCAGGGGGAATGCCTTCCTTGT-CTTGAATCT 1684662
Query 39201 CTG-TTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCG 39259
|| |||| | | | |||||||| || ||||| |||| |||||| | || || |
Sbjct 1684661 TTGACTTGACATTGTCAATAGTATCGCTGGATTCCACTTCCAATGTGATAGTCTTGCCAG 1684602
Query 39260 TCAGCGTTTTAACAAAGATTTGCAT 39284
||| || || || |||||||||||
Sbjct 1684601 TCAAAGTCTTGACGAAGATTTGCAT 1684577
Score = 98.7 bits (108), Expect = 9e-16
Identities = 139/193 (72%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 39081 ATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTG 39140
|||||| ||| ||| ||||| |||||||| |||| ||||| || | || ||||||||
Sbjct 1684324 ATGTAGAGTGGACTCCTTTTGGATATTATAGTCGGACAGTGTGCGGCCATCTTCAAGCTG 1684265
Query 39141 TTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTT 39200
|||||| || || || || ||||| ||||||| || | | ||| |||||| ||| ||
Sbjct 1684264 TTTGCCAGCGAAAATCAGGCGCTGTTGGTCGGGAGGAATACCCTCCTTGTCCTGGATCTT 1684205
Query 39201 CTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCG 39259
| |||| ||| | | | || ||| |||||||| || | ||||| | ||||| |
Sbjct 1684204 CGACTTGA-CGTTGTCGATGGTGTCGGATGACTCCACCTCGAGGGTGATGGTCTTTCCGG 1684146
Query 39260 TCAGCGTTTTAAC 39272
| || || || ||
Sbjct 1684145 TGAGGGTCTTGAC 1684133
Score = 93.3 bits (102), Expect = 4e-14
Identities = 138/193 (72%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152
||| || || || || ||||| | || ||||| |||| || ||||| || || |||||
Sbjct 1684540 CTCCTTCTGAATGTTGTAATCAGACAGCGTTCGGCCGTCCTCGAGCTGCTTACCAGCAAA 1684481
Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTG-TTTGAGCG 39211
||||||||||| || |||| ||| | || ||||| ||| ||| | | || |||||
Sbjct 1684480 GATAAGACGCTGTTGATCGGGGGGAATGCCTTCTTTATCC-TGAATCTTTGATTTGACAT 1684422
Query 39212 TCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAA 39271
| | | ||| || ||||| || || | |||||| | ||||| |||| || || |
Sbjct 1684421 TGTCAATCGTGTCCGAGGACTCGACTTCTAACGTGATTGTCTTTCCAGTCAAAGTCTTGA 1684362
Query 39272 CAAAGATTTGCAT 39284
| |||||||||||
Sbjct 1684361 CGAAGATTTGCAT 1684349
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429543678723071
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |