Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metarhizium_20robertsii_20[genbank_20GCA_5F000591435.1_202014-03-17] 367 sequences; 40,317,276 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq1 114 1e-20 >seq1 Length=5053378 Score = 114 bits (126), Expect = 1e-20 Identities = 150/205 (73%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 39081 ATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTG 39140 ||| || |||||||| || || |||||||| ||| || || || |||| || ||||| Sbjct 1684780 ATGCAGGGTGCTCTCCTTCTGGATATTATAGTCGCTGAGGGTGCGACCGTCTTCCAGCTG 1684721 Query 39141 TTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTT 39200 ||||| ||||| ||||||||||| ||||| | ||| | || || |||| | ||| | | Sbjct 1684720 CTTGCCAGCAAAGATAAGACGCTGTTGGTCAGGGGGAATGCCTTCCTTGT-CTTGAATCT 1684662 Query 39201 CTG-TTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCG 39259 || |||| | | | |||||||| || ||||| |||| |||||| | || || | Sbjct 1684661 TTGACTTGACATTGTCAATAGTATCGCTGGATTCCACTTCCAATGTGATAGTCTTGCCAG 1684602 Query 39260 TCAGCGTTTTAACAAAGATTTGCAT 39284 ||| || || || ||||||||||| Sbjct 1684601 TCAAAGTCTTGACGAAGATTTGCAT 1684577 Score = 98.7 bits (108), Expect = 9e-16 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 39081 ATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTG 39140 |||||| ||| ||| ||||| |||||||| |||| ||||| || | || |||||||| Sbjct 1684324 ATGTAGAGTGGACTCCTTTTGGATATTATAGTCGGACAGTGTGCGGCCATCTTCAAGCTG 1684265 Query 39141 TTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTT 39200 |||||| || || || || ||||| ||||||| || | | ||| |||||| ||| || Sbjct 1684264 TTTGCCAGCGAAAATCAGGCGCTGTTGGTCGGGAGGAATACCCTCCTTGTCCTGGATCTT 1684205 Query 39201 CTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCG 39259 | |||| ||| | | | || ||| |||||||| || | ||||| | ||||| | Sbjct 1684204 CGACTTGA-CGTTGTCGATGGTGTCGGATGACTCCACCTCGAGGGTGATGGTCTTTCCGG 1684146 Query 39260 TCAGCGTTTTAAC 39272 | || || || || Sbjct 1684145 TGAGGGTCTTGAC 1684133 Score = 93.3 bits (102), Expect = 4e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || ||||| | || ||||| |||| || ||||| || || ||||| Sbjct 1684540 CTCCTTCTGAATGTTGTAATCAGACAGCGTTCGGCCGTCCTCGAGCTGCTTACCAGCAAA 1684481 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTG-TTTGAGCG 39211 ||||||||||| || |||| ||| | || ||||| ||| ||| | | || ||||| Sbjct 1684480 GATAAGACGCTGTTGATCGGGGGGAATGCCTTCTTTATCC-TGAATCTTTGATTTGACAT 1684422 Query 39212 TCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAA 39271 | | | ||| || ||||| || || | |||||| | ||||| |||| || || | Sbjct 1684421 TGTCAATCGTGTCCGAGGACTCGACTTCTAACGTGATTGTCTTTCCAGTCAAAGTCTTGA 1684362 Query 39272 CAAAGATTTGCAT 39284 | ||||||||||| Sbjct 1684361 CGAAGATTTGCAT 1684349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429543678723071