Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metarhizium_20robertsii_20[genbank_20GCA_5F000591435.1_202014-03-17] 367 sequences; 40,317,276 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq1 102 6e-17 >seq1 Length=5053378 Score = 102 bits (112), Expect = 6e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || ||||| || || | || ||||| || ||||| | ||||| || ||| || Sbjct 1684349 ATGCAAATCTTCGTCAAGACTTTGACTGGAAAGACAATCACGTTAGAAGTCGAGTCCTCG 1684408 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | ||| |||| | || || |||||||| | || || ||||| Sbjct 1684409 GACACGATTGACAATGTCAAATCAAAGA-TTCAGGATAAAGAAGGCATTCCCCCCGATCA 1684467 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||||| | || ||||| || || || || || |||| || || | |||||||| Sbjct 1684468 ACAGCGTCTTATCTTTGCTGGTAAGCAGCTCGAGGACGGCCGAACGCTGTCTGATTACAA 1684527 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || ||||| || Sbjct 1684528 CATTCAGAAGGAGTCTAC 1684545 Score = 98.7 bits (108), Expect = 7e-16 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || || ||||| |||||||| || || |||||||| || || || || | Sbjct 1683820 ATGCAAATCTTTGTCAAAACTCTCACGGGCAAGACCATCACTCTTGAGGTCGAGTCGTCC 1683879 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| |||| | || | || ||||| || ||| | ||||| || || Sbjct 1683880 GACACCATCGACAATGTTAAGTCGAAGA-TTCAGGACAAGGAGGGTATCCCGCCTGACCA 1683938 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| ||||| || || ||||| || || || || | || || | |||||||| Sbjct 1683939 ACAGCGCTTAATTTTCGCTGGCAAGCAGCTTGAGGATGGCCGTACCCTCTCGGATTACAA 1683998 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || || ||||| Sbjct 1683999 CATCCAGAAGGAATCCAC 1684016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338008088146436