Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metarhizium_20robertsii_20[genbank_20GCA_5F000591435.1_202014-03-17] 367 sequences; 40,317,276 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq1 176 1e-38 seq10 123 6e-23 seq367 114 3e-20 >seq1 Length=5053378 Score = 176 bits (194), Expect = 1e-38 Identities = 172/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||||| |||||||||||||||||| || || || || | |||||||| | || || Sbjct 1684570 ACGAAGTCGCAGGACAAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAATCAGACAGCGT 1684511 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 || || || || |||||||| ||||| |||||||| || ||||| ||||| ||||| || Sbjct 1684510 TCGGCCGTCCTCGAGCTGCTTACCAGCAAAGATAAGACGCTGTTGATCGGGGGGAATGCC 1684451 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||| || || || |||||| || ||| || || ||||| |||| || || ||||| Sbjct 1684450 TTCTTTATCCTGAATCTTTGATTTGACATTGTCAATCGTGTCCGAGGACTCGACTTCTAA 1684391 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||| ||||| || |||||||| || | ||| | |||||| Sbjct 1684390 CGTGATTGTCTTTCCAGTCAAAGTCTTGACGAAGATTTGCAT 1684349 Score = 163 bits (180), Expect = 7e-35 Identities = 155/198 (78%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||||| ||||||||| || |||||||| || ||||||| ||| || |||| || || Sbjct 1684342 ACGAAGTCGCAGGACAAGATGTAGAGTGGACTCCTTTTGGATATTATAGTCGGACAGTGT 1684283 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| ||||| || |||||||| || || || ||||||||||| |||||||| Sbjct 1684282 GCGGCCATCTTCAAGCTGTTTGCCAGCGAAAATCAGGCGCTGTTGGTCGGGAGGAATACC 1684223 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||| || ||||||||||| || | ||||| || | Sbjct 1684222 CTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCGGATGACTCCACCTCGAG 1684163 Query 225672 CGTGATCGTCTTGCCCGT 225689 ||||| ||||| || || Sbjct 1684162 GGTGATGGTCTTTCCGGT 1684145 Score = 149 bits (164), Expect = 1e-30 Identities = 166/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || ||||| || |||||||| || |||| |||||||| | | || Sbjct 1684041 ACGAAGGCGGAGAACGAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAATCCGAGAGGGT 1683982 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| |||||||| || | || |||||||| ||||| ||||| Sbjct 1683981 ACGGCCATCCTCAAGCTGCTTGCCAGCGAAAATTAAGCGCTGTTGGTCAGGCGGGATACC 1683922 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| || ||||| ||| ||| ||||||||||| || | || || || | Sbjct 1683921 CTCCTTGTCCTGAATCTTCGACTTAACATTGTCGATGGTGTCGGACGACTCGACCTCAAG 1683862 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||||||||| | |||||| | || | |||||| Sbjct 1683861 AGTGATGGTCTTGCCCGTGAGAGTTTTGACAAAGATTTGCAT 1683820 Score = 143 bits (158), Expect = 6e-29 Identities = 165/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || || || || ||| || || |||| ||| || ||| | || Sbjct 1684798 ACGAAGACGGAGAACGAGATGCAGGGTGCTCTCCTTCTGGATATTATAGTCGCTGAGGGT 1684739 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || ||||| |||||||| ||||| |||||||| || |||||||| || ||||| || Sbjct 1684738 GCGACCGTCTTCCAGCTGCTTGCCAGCAAAGATAAGACGCTGTTGGTCAGGGGGAATGCC 1684679 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||||||| |||||| ||| ||| || || || || || |||||| || || Sbjct 1684678 TTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTATCGCTGGATTCCACTTCCAA 1684619 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||||||| |||||||| || | ||| | |||||| Sbjct 1684618 TGTGATAGTCTTGCCAGTCAAAGTCTTGACGAAGATTTGCAT 1684577 Score = 131 bits (144), Expect = 4e-25 Identities = 164/225 (73%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | ||| || | ||| || ||| || || |||| ||||| ||| || || Sbjct 3941184 ACGCAGGCGCAGCACCAAGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGT 3941243 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| ||||||||||| ||||| ||||||||||| || || || Sbjct 3941244 GCGGCCATCCTCGAGCTGCTTACCAGCGAAGATGAGTCGCTGTTGGTCGGGGGGGATGCC 3941303 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||| || ||||||||||| || | ||||| || | Sbjct 3941304 CTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAG 3941363 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| ||||| ||||| | || || | ||| | ||||| || Sbjct 3941364 GGTGATAGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTT 3941408 >seq10 Length=656475 Score = 123 bits (136), Expect = 6e-23 Identities = 127/166 (77%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || |||| ||||| |||| |||||||| ||||| || ||||| || ||||| ||||| Sbjct 567917 TTCTGGATGTTGTAGTCGGACAAAGTTCGGCCATCCTCGAGCTGTTTGCCAGCAAAGATC 567976 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 | ||| || ||||| || |||||||| |||||||| |||||||| ||| ||| ||| Sbjct 567977 AATCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 568036 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCA 225691 || || || |||| || || || | || || ||||||||||||| Sbjct 568037 ATCGTATCGGAGGACTCGACCTCAAGGGTAATGGTCTTGCCCGTCA 568082 >seq367 Length=24944 Score = 114 bits (126), Expect = 3e-20 Identities = 196/281 (70%), Gaps = 5/281 (2%) Strand=Plus/Plus Query 7440 AACGTTATATTTAATATTTGGTGGCTTTTCTGGTATTAT-AGGTACTATATTTTCTATGA 7498 ||| ||||| |||||||||| | || || || ||||| ||||||| | || | Sbjct 17388 AACTTTATACTTAATATTTGCTTTATTCTCAGG-ATTATTAGGTACTGCTATGTCAGTAT 17446 Query 7499 TTATAAGGTTAGAATTAGCTGCTCCGGGTTCTCAAATATTGAGTGGTAATAGCCAACTTT 7558 | ||||| ||||||||| || ||| || ||| || | |||| |||| | | Sbjct 17447 TAATAAGATTAGAATTAAGTGGTCCAGGAGTACAA---TTCATATCAAATAACCAATTAT 17503 Query 7559 ACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTA 7618 | ||| ||| |||| || || || || | ||||| |||||| | |||||||| | Sbjct 17504 ATAACAGTATCGTTACAGCTCACGCTTTATTAATGATATTCTTTATGGTTATGCCTGCAT 17563 Query 7619 TGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTT 7678 | || || || || ||||||| | | || |||||| | |||| ||||||||||||| Sbjct 17564 TAATCGGAGGATTTGGAAATTTCCTAATGCCATTAATGGTAGGTGGACCTGATATGGCTT 17623 Query 7679 TTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCT 7719 | || || | || ||||||||||| |||||| |||| ||| Sbjct 17624 TCCCTAGATTAAATAATATAAGTTTCTGATTATTACCTCCT 17664 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192525592494698