Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metarhizium_20robertsii_20[genbank_20GCA_5F000591435.1_202014-03-17] 367 sequences; 40,317,276 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq30 221 2e-52 seq3 96.9 5e-15 >seq30 Length=309456 Score = 221 bits (244), Expect = 2e-52 Identities = 454/673 (67%), Gaps = 4/673 (1%) Strand=Plus/Minus Query 77955 CCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATA 78014 ||||||||||| || || ||||||| | |||||| || | | || || || ||||| Sbjct 47661 CCAGGGCATTCGTTGGGACACATCAGAGTCCAGTCGCCGTTCTTCTCGACACGCTTCATG 47602 Query 78015 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCT 78074 ||||| || || ||||| || |||| || ||||| || | | ||| || || || Sbjct 47601 AAGAGGTCGGGAATCCAGAGGGCAAGGAAAAGATCACGAGCACGGACTTCCTCCTTGCCG 47542 Query 78075 GTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATT 78134 || ||| | |||||||| ||||| | || ||||| ||||| || || || || ||| Sbjct 47541 TGGTTTTTTCTGAGATCGAGGAACTCGAAAACATCAGCGTGCCAAGGCTCCAGGTAGATT 47482 Query 78135 GCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAA 78194 || | | || || || || || || ||||| || | ||||||||| ||||| || | Sbjct 47481 GCAAAGGCACCGGGACGCTTGTTGCCACCCTGGTCAACATATCTGGCAGTGTTGTTGAAC 47422 Query 78195 ACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCA 78254 || | | ||| ||||| || ||||| || || || || || |||| ||| ||| ||| Sbjct 47421 ACACGGAGCATGGGAATGATGCCGTTGGAGGTGCCGTTGGTACCAGCAATGTAAGAGCCA 47362 Query 78255 CTTGCGCGAAT--ATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAG 78312 | || ||||| | || || | || || || || |||||||| || || | | Sbjct 47361 GTGGCACGAATGCGGTGGACATTGAGA--CCGATGCCACCGGCCATCTTGGAAATCATGG 47304 Query 78313 CGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAA 78372 | ||| || | || |||||||| || || |||||||||||| |||||| | ||| | Sbjct 47303 CACAAGTCTTGAGAGTGTCGTAGATGCCGTCGATACTGTCATCCTTCATGTCCACAAGGA 47244 Query 78373 AACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCG 78432 | || ||| | || ||| ||| || ||||| || | ||| || || ||||| | Sbjct 47243 AGCACGAAGAAAGCTGGGCTTGAGGAGTACCAGCATTGAAGAGTGTAGGTGAGGCATGGG 47184 Query 78433 TAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGAT 78492 | || |||| || | || ||||| |||||||| | || |||| | Sbjct 47183 TGAAGAATTTGCTTGACATGAGGTTGTAGGTTTCAATGACGCGCTCAATGTTGTCTCCCC 47124 Query 78493 GAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTA 78552 || || || || |||||||| | |||||| ||||||| |||||| ||||| || | Sbjct 47123 AGATACCGACAGCAACACGCATAATCATATGTTGAGGTCGTTCAACGATCTTACCGTTGA 47064 Query 78553 TTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTC 78612 |||| | |||||| |||| || || || |||||||| | ||| ||||| | Sbjct 47063 GCTTCAGAAGATATGATCGCTCCAGGGTCTTGAAGCCAAAATACTGGTAGTTGAAGTCCC 47004 Query 78613 TCTCGTAAATAAT 78625 | ||||| | ||| Sbjct 47003 TGTCGTAGACAAT 46991 >seq3 Length=2231953 Score = 96.9 bits (106), Expect = 5e-15 Identities = 206/305 (68%), Gaps = 7/305 (2%) Strand=Plus/Plus Query 48402 TCTTTAACGTAAGTATCTATTA--AAAGACTATACATTTCGGAGTGAATATTTTCAATTG 48459 ||||| | ||| ||||| || | || || || |||| ||||| || || || || Sbjct 1242243 TCTTTGATGTAGGTATCGATCAGCAATGAGTAGG--TTTCTGAGTGGATGTTCTCCATCA 1242300 Query 48460 CCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTT 48519 || || || ||||| || || | || || | |||||| ||||| | || || | Sbjct 1242301 TAATTTGGAAGCCGTAGAAGCAGCGGGCCTCGGGGATCTGAACCTCGCCGCTGAAGCGCT 1242360 Query 48520 CAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAA 48579 | ||| |||||| || || || ||||| ||||| || || || | | ||| || Sbjct 1242361 CGACCAGATTCTCGTTGACGATACCATCTGAGGCAGCGAAGAAAGCCAGGATATGAGAAA 1242420 Query 48580 TAAAATATTTTTCGTTGGAAGTCA---GTTTATTCCAGTCATTGATATCTTTTGATATAT 48636 | ||||||||||||| | | ||| | || |||||||| | | |||||| || | || Sbjct 1242421 TGAAATATTTTTCGTCGTCATTCAGACGGTTGTTCCAGTCGTGCAGATCTTTGGAGAGAT 1242480 Query 48637 CTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATATATCAC 48696 | | || || || ||||| || || || || ||||| || ||||| | ||| || | | Sbjct 1242481 CAATCTCCTCGGCCGTCCAGAAAGAAGCTTCAGCTTTCTTGTACATTTGCCAGATCTAAT 1242540 Query 48697 TGTAT 48701 ||||| Sbjct 1242541 TGTAT 1242545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694665613206880