Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metarhizium_20robertsii_20[genbank_20GCA_5F000591435.1_202014-03-17]
367 sequences; 40,317,276 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq30 242 5e-59
seq3 96.9 5e-15
>seq30
Length=309456
Score = 242 bits (268), Expect = 5e-59
Identities = 469/692 (68%), Gaps = 0/692 (0%)
Strand=Plus/Minus
Query 76550 CCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATA 76609
||||| ||||| || |||||||||| | ||| || || | | || || || |||||
Sbjct 47661 CCAGGGCATTCGTTGGGACACATCAGAGTCCAGTCGCCGTTCTTCTCGACACGCTTCATG 47602
Query 76610 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCT 76669
||||| || || ||||| || |||| || ||||| || | | ||| || || ||
Sbjct 47601 AAGAGGTCGGGAATCCAGAGGGCAAGGAAAAGATCACGAGCACGGACTTCCTCCTTGCCG 47542
Query 76670 GTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATC 76729
|| ||| | ||||| |||||||| | || ||||| ||||| || || || || ||
Sbjct 47541 TGGTTTTTTCTGAGATCGAGGAACTCGAAAACATCAGCGTGCCAAGGCTCCAGGTAGATT 47482
Query 76730 GCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAA 76789
|| | |||| || || || || || ||||| || | ||||||||||||||| || |
Sbjct 47481 GCAAAGGCACCGGGACGCTTGTTGCCACCCTGGTCAACATATCTGGCAGTGTTGTTGAAC 47422
Query 76790 ACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCA 76849
|| | | ||| ||||| |||||||| || || || || || |||| ||| ||| |||
Sbjct 47421 ACACGGAGCATGGGAATGATGCCGTTGGAGGTGCCGTTGGTACCAGCAATGTAAGAGCCA 47362
Query 76850 CATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCA 76909
|||||||| | | || || || || || ||||| || || || | |||
Sbjct 47361 GTGGCACGAATGCGGTGGACATTGAGACCGATGCCACCGGCCATCTTGGAAATCATGGCA 47302
Query 76910 CAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAA 76969
|| || | ||||| |||||||| || ||||| |||||| |||||| | ||| ||
Sbjct 47301 CAAGTCTTGAGAGTGTCGTAGATGCCGTCGATACTGTCATCCTTCATGTCCACAAGGAAG 47242
Query 76970 CAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTG 77029
|| ||| | || ||| ||| || ||||| || | |||||| || ||||| |||
Sbjct 47241 CACGAAGAAAGCTGGGCTTGAGGAGTACCAGCATTGAAGAGTGTAGGTGAGGCATGGGTG 47182
Query 77030 AACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGA 77089
|| |||| || | || ||||| |||||||| || || || | |
Sbjct 47181 AAGAATTTGCTTGACATGAGGTTGTAGGTTTCAATGACGCGCTCAATGTTGTCTCCCCAG 47122
Query 77090 ATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATT 77149
|| || ||||| |||||||| | |||||| ||||||||||| || ||||| || |
Sbjct 47121 ATACCGACAGCAACACGCATAATCATATGTTGAGGTCGTTCAACGATCTTACCGTTGAGC 47062
Query 77150 TTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTT 77209
|||| | |||||| |||| || || || |||||||| | ||| ||||| ||
Sbjct 47061 TTCAGAAGATATGATCGCTCCAGGGTCTTGAAGCCAAAATACTGGTAGTTGAAGTCCCTG 47002
Query 77210 TCGTAAATAATAACCGAATTTAGTTTGTCCTT 77241
||||| | ||| |||| | || | ||||||
Sbjct 47001 TCGTAGACAATGGCCGAGTCGAGCTCGTCCTT 46970
>seq3
Length=2231953
Score = 96.9 bits (106), Expect = 5e-15
Identities = 177/259 (68%), Gaps = 3/259 (1%)
Strand=Plus/Plus
Query 46925 TTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAA 46984
||||||| || ||||| || || || || || ||||| || || | || || | |
Sbjct 1242277 TTTCTGAGTGGATGTTCTCCATCATAATTTGGAAGCCGTAGAAGCAGCGGGCCTCGGGGA 1242336
Query 46985 TCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAG 47044
|||| ||||| | || || || || |||||| || || || ||||| ||||
Sbjct 1242337 TCTGAACCTCGCCGCTGAAGCGCTCGACCAGATTCTCGTTGACGATACCATCTGAGGCAG 1242396
Query 47045 CAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCA---GTTTATTCC 47101
| || || |||| | ||| ||| ||||||||||| ||| | ||| | || ||||
Sbjct 1242397 CGAAGAAAGCCAGGATATGAGAAATGAAATATTTTTCGTCGTCATTCAGACGGTTGTTCC 1242456
Query 47102 AGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTT 47161
|||| | | |||||| || | ||| | || || || |||||||| || || || ||||
Sbjct 1242457 AGTCGTGCAGATCTTTGGAGAGATCAATCTCCTCGGCCGTCCAGAAAGAAGCTTCAGCTT 1242516
Query 47162 TTTTATACATATTCCATAT 47180
| || ||||| | ||| ||
Sbjct 1242517 TCTTGTACATTTGCCAGAT 1242535
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712931129413440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |