Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metarhizium_20robertsii_20[genbank_20GCA_5F000591435.1_202014-03-17] 367 sequences; 40,317,276 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq1 163 7e-35 seq10 118 3e-21 >seq1 Length=5053378 Score = 163 bits (180), Expect = 7e-35 Identities = 161/208 (77%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990 |||| || || ||||| ||||| || ||||||||||||||||| || |||||||||| Sbjct 1684131 TCGTCAAGACCCTCACCGGAAAGACCATCACCCTCGAGGTGGAGTCATCCGACACCATCG 1684190 Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050 | |||||||| ||||| |||||||| || || || ||||| ||||| || || || | Sbjct 1684191 ACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCTCCCGACCAACAGCGCCTGA 1684250 Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110 | ||||| || |||||||| |||||||| | || || |||| ||||| ||||||| | Sbjct 1684251 TTTTCGCTGGCAAACAGCTTGAAGATGGCCGCACACTGTCCGACTATAATATCCAAAAGG 1684310 Query 178111 AATCAACACTGCATCTTGTTTTGAGACT 178138 | || || || |||||||| || |||| Sbjct 1684311 AGTCCACTCTACATCTTGTCCTGCGACT 1684338 Score = 141 bits (156), Expect = 2e-28 Identities = 144/188 (77%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || ||||| || || || |||||||| |||||||| || ||| Sbjct 3941402 CAGATTTTCGTCAAGACCCTCACGGGGAAGACTATCACCCTTGAGGTGGAGTCTTCCGAC 3941343 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||| |||||||| || || ||||| || ||||| || Sbjct 3941342 ACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAACAG 3941283 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||| |||||||| || || |||||||| ||||| | || || ||| || ||| || Sbjct 3941282 CGACTCATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATC 3941223 Query 178104 CAAAAAGA 178111 || || || Sbjct 3941222 CAGAAGGA 3941215 Score = 131 bits (144), Expect = 4e-25 Identities = 153/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || ||||||||||| || || || ||||| || ||||| || || ||| Sbjct 1683823 CAAATCTTTGTCAAAACTCTCACGGGCAAGACCATCACTCTTGAGGTCGAGTCGTCCGAC 1683882 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || || |||||||||||||| || || ||||| || ||||| || Sbjct 1683883 ACCATCGACAATGTTAAGTCGAAGATTCAGGACAAGGAGGGTATCCCGCCTGACCAACAG 1683942 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || ||||| || || ||||| || ||||| | || || | ||||| ||| || Sbjct 1683943 CGCTTAATTTTCGCTGGCAAGCAGCTTGAGGATGGCCGTACCCTCTCGGATTACAACATC 1684002 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || ||||| || || || || ||| Sbjct 1684003 CAGAAGGAATCCACCCTTCACCTCGTT 1684029 Score = 127 bits (140), Expect = 5e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || ||| | || ||||| || ||||| | || || || ||| ||| Sbjct 1684352 CAAATCTTCGTCAAGACTTTGACTGGAAAGACAATCACGTTAGAAGTCGAGTCCTCGGAC 1684411 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || |||||| |||||||||||| |||||||| || || || || || || Sbjct 1684412 ACGATTGACAATGTCAAATCAAAGATTCAGGATAAAGAAGGCATTCCCCCCGATCAACAG 1684471 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||| || || || |||||||| || || | || || | ||||| ||| | Sbjct 1684472 CGTCTTATCTTTGCTGGTAAGCAGCTCGAGGACGGCCGAACGCTGTCTGATTACAACATT 1684531 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 || || || || || || || ||||| || |||| Sbjct 1684532 CAGAAGGAGTCTACTCTCCACCTTGTCCTGCGACT 1684566 >seq10 Length=656475 Score = 118 bits (130), Expect = 3e-21 Identities = 134/180 (74%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCAT 177988 ||| ||||| || || || || || || || ||||| ||||| || ||| || || || Sbjct 568096 TTTTGTGAAGACCCTGACGGGCAAGACCATTACCCTTGAGGTCGAGTCCTCCGATACGAT 568037 Query 177989 CGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACT 178048 ||| || ||||| ||||| |||||||| || || || || ||||||||||| ||| | Sbjct 568036 CGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATTCCCCCGGACCAGCAGCGATT 567977 Query 178049 TATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108 ||||| || || ||||||||||| ||||| | ||| | |||| || ||| |||| || Sbjct 567976 GATCTTTGCTGGCAAACAGCTCGAGGATGGCCGAACTTTGTCCGACTACAACATCCAGAA 567917 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203725539830198