Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metarhizium_20robertsii_20[genbank_20GCA_5F000591435.1_202014-03-17] 367 sequences; 40,317,276 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq1 158 1e-33 >seq1 Length=5053378 Score = 158 bits (174), Expect = 1e-33 Identities = 174/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 |||||| || ||||| | || |||||||| |||||||||||||| || ||||||||| Sbjct 1684804 GCCGCCACGAAGACGGAGAACGAGATGCAGGGTGCTCTCCTTCTGGATATTATAGTCGCT 1684745 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||||||||| |||| || ||||||||||| || || || || ||||||||||| | ||| Sbjct 1684744 GAGGGTGCGACCGTCTTCCAGCTGCTTGCCAGCAAAGATAAGACGCTGTTGGTCAGGGGG 1684685 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 || || ||||||| | ||| | |||| | || | | | ||| ||||| || |||| Sbjct 1684684 AATGCCTTCCTTGT-CTTGAATCTTTGACTTGACATTGTCAATAGTATCGCTGGATTCCA 1684626 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | |||| || || || || || |||| ||||| ||||| || ||||| Sbjct 1684625 CTTCCAATGTGATAGTCTTGCCAGTCAAAGTCTTGACGAAGATTTGCAT 1684577 Score = 158 bits (174), Expect = 1e-33 Identities = 177/234 (76%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 41633 CCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCG 41692 || || || || || || | ||||| ||||| |||||||||||||| ||||| |||||| Sbjct 3941176 CCACCACCACGCAGGCGCAGCACCAAGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCG 3941235 Query 41693 GAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCG 41752 |||||||| | || ||||||||||| || ||||| || || ||||||||||| | | Sbjct 3941236 CTCAGGGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAGATGAGTCGCTGTTGGTCGGGG 3941295 Query 41753 GGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTC 41811 || | || |||||||||| ||| || ||| ||| | | | |||||| ||||| Sbjct 3941296 GGGATGCCCTCCTTGTCCTGGATCTTGGACTT-GACGTTGTCGATGGTGTCGGAAGACTC 3941354 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 |||||| | || || || || ||||| || ||||| |||||||||||||| || Sbjct 3941355 CACCTCAAGGGTGATAGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTT 3941408 Score = 120 bits (132), Expect = 3e-22 Identities = 159/218 (73%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || ||||| || ||| |||||| || || ||||||||||| Sbjct 1684347 CCACCACGAAGTCGCAGGACAAGATGTAGAGTGGACTCCTTTTGGATATTATAGTCGGAC 1684288 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || ||||| ||||| ||||| ||||||||||||||||| | ||| Sbjct 1684287 AGTGTGCGGCCATCTTCAAGCTGTTTGCCAGCGAAAATCAGGCGCTGTTGGTCGGGAGGA 1684228 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| ||| || ||| ||| | | | |||||| |||||||| Sbjct 1684227 ATACCCTCCTTGTCCTGGATCTTCGACTT-GACGTTGTCGATGGTGTCGGATGACTCCAC 1684169 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGA 41852 ||| | || || || || || || || ||||| |||| Sbjct 1684168 CTCGAGGGTGATGGTCTTTCCGGTGAGGGTCTTGACGA 1684131 Score = 109 bits (120), Expect = 5e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || || || || ||| |||||||| ||||| || || ||| Sbjct 1684046 CCACCACGAAGGCGGAGAACGAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAATCCGAG 1683987 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || | || || ||||||||||| ||||| || | |||||||||||| | || Sbjct 1683986 AGGGTACGGCCATCCTCAAGCTGCTTGCCAGCGAAAATTAAGCGCTGTTGGTCAGGCGGG 1683927 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| ||| | || | | ||| | | | |||||| |||||| || Sbjct 1683926 ATACCCTCCTTGTCC-TGAATCTTCGACTTAACATTGTCGATGGTGTCGGACGACTCGAC 1683868 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||| | || || || || ||||| || || || || || || |||||| Sbjct 1683867 CTCAAGAGTGATGGTCTTGCCCGTGAGAGTTTTGACAAAGATTTGCATG 1683819 Score = 98.7 bits (108), Expect = 9e-16 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 ||||||||||||||| || || || || || || |||| ||||||||||| || || || Sbjct 1684540 CTCCTTCTGAATGTTGTAATCAGACAGCGTTCGGCCGTCCTCGAGCTGCTTACCAGCAAA 1684481 Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGA 41790 || || |||||||| || | ||||| || || || ||| ||| | |||| || || Sbjct 1684480 GATAAGACGCTGTTGATCGGGGGGAATGCCTTCTTTATCC-TGAATCTTTGATTTGACAT 1684422 Query 41791 CGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTA 41849 | | | ||||| ||||| || || | ||| || || || || |||| ||||| | Sbjct 1684421 TGTCAATCGTGTCCGAGGACTCGACTTCTAACGTGATTGTCTTTCCAGTCAAAGTCTTGA 1684362 Query 41850 CGAAAATCTGCAT 41862 |||| || ||||| Sbjct 1684361 CGAAGATTTGCAT 1684349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462301879180400