Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23]
173 sequences; 38,835,037 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq3 129 1e-24
>seq3
Length=3980562
Score = 129 bits (142), Expect = 1e-24
Identities = 188/265 (71%), Gaps = 2/265 (1%)
Strand=Plus/Plus
Query 230386 ATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC 230445
||||| | || || || | | |||| |||||||| || || ||| | || || |
Sbjct 2739284 ATCATCATCGATGCTGTCAAGATCGAACAGGAGTTCCTTACCGAGGCTCTGCCCTGCGCC 2739343
Query 230446 CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505
|| ||||||||||| | | || ||| ||||||||||| ||||| ||||||||| |
Sbjct 2739344 CTGCTTGGCATGAACTCGAACCTCATGAAGCAGTACATCGAGTTCGTCGCCGACCGCCTC 2739403
Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565
| || || || || ||||||| || ||| | | |||||||||| || ||||||
Sbjct 2739404 CTCGTCGCTCTCGGCAACGAGAAGGTCTACCGTGCCACCAACCCCTTTGACTTCATGGAG 2739463
Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGG 230625
||| || || || ||||||||||||||||| ||||| ||| | || || |||| |
Sbjct 2739464 AACATCTCCCTGGGCGGCAAGACCAACTTCTTCGAGAAGCGCGTCGGCGAGTACCAGAAG 2739523
Query 230626 CCTGGTGTGATG--AAGCCCGAAGA 230648
| ||||| ||| ||| ||||||
Sbjct 2739524 GCCGGTGTCATGGCCAGCACGAAGA 2739548
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057821655266990
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |