Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23] 173 sequences; 38,835,037 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq3 129 1e-24 >seq3 Length=3980562 Score = 129 bits (142), Expect = 1e-24 Identities = 188/265 (71%), Gaps = 2/265 (1%) Strand=Plus/Plus Query 230386 ATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC 230445 ||||| | || || || | | |||| |||||||| || || ||| | || || | Sbjct 2739284 ATCATCATCGATGCTGTCAAGATCGAACAGGAGTTCCTTACCGAGGCTCTGCCCTGCGCC 2739343 Query 230446 CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505 || ||||||||||| | | || ||| ||||||||||| ||||| ||||||||| | Sbjct 2739344 CTGCTTGGCATGAACTCGAACCTCATGAAGCAGTACATCGAGTTCGTCGCCGACCGCCTC 2739403 Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565 | || || || || ||||||| || ||| | | |||||||||| || |||||| Sbjct 2739404 CTCGTCGCTCTCGGCAACGAGAAGGTCTACCGTGCCACCAACCCCTTTGACTTCATGGAG 2739463 Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGG 230625 ||| || || || ||||||||||||||||| ||||| ||| | || || |||| | Sbjct 2739464 AACATCTCCCTGGGCGGCAAGACCAACTTCTTCGAGAAGCGCGTCGGCGAGTACCAGAAG 2739523 Query 230626 CCTGGTGTGATG--AAGCCCGAAGA 230648 | ||||| ||| ||| |||||| Sbjct 2739524 GCCGGTGTCATGGCCAGCACGAAGA 2739548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057821655266990