Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23]
173 sequences; 38,835,037 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq3 96.9 4e-15
>seq3
Length=3980562
Score = 96.9 bits (106), Expect = 4e-15
Identities = 193/284 (68%), Gaps = 3/284 (1%)
Strand=Plus/Minus
Query 17237 TACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAAT 17296
|| || || ||||| || ||| | |||||||| ||||||||||| ||||| ||
Sbjct 2738891 TAGGTGTCAATGAGCAGCGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAG 2738832
Query 17297 CCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTT 17356
||||| ||||| || || || | || || || || || ||| || || | || ||
Sbjct 2738831 CCGTAGAAGCAGCGCGCCTCGGGAATCTGGACCTCGCCGCTGAAGCGCTCGACCAGGTTC 2738772
Query 17357 TCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTT 17416
||||| ||||||||||| |||||||| || |||| || ||| ||||| || ||
Sbjct 2738771 TCGTTGACGATGCCGTCCGAGGCGGCGAAGAAGGCCAGGATGTGCGAGATGAAGTACTTC 2738712
Query 17417 TCGTC--CGGTG-TAAGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCG 17473
|| || || || | | |||||| | | ||| ||||| | ||| | || |||
Sbjct 2738711 TCATCCTCGTTGATCTTGTTGTTCCAGTCGTGGAGATCCTTGGAGAGATCGATCTCCTCG 2738652
Query 17474 GGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAAT 17517
| ||||| ||| ||| | ||||| || ||||| | ||| ||
Sbjct 2738651 GCAGTCCAGAAAGATGCCTCGGCCTTCTTGTACATTTGCCAGAT 2738608
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517544480807640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |