Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23] 173 sequences; 38,835,037 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq3 96.9 4e-15 >seq3 Length=3980562 Score = 96.9 bits (106), Expect = 4e-15 Identities = 193/284 (68%), Gaps = 3/284 (1%) Strand=Plus/Minus Query 17237 TACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAAT 17296 || || || ||||| || ||| | |||||||| ||||||||||| ||||| || Sbjct 2738891 TAGGTGTCAATGAGCAGCGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAG 2738832 Query 17297 CCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTT 17356 ||||| ||||| || || || | || || || || || ||| || || | || || Sbjct 2738831 CCGTAGAAGCAGCGCGCCTCGGGAATCTGGACCTCGCCGCTGAAGCGCTCGACCAGGTTC 2738772 Query 17357 TCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTT 17416 ||||| ||||||||||| |||||||| || |||| || ||| ||||| || || Sbjct 2738771 TCGTTGACGATGCCGTCCGAGGCGGCGAAGAAGGCCAGGATGTGCGAGATGAAGTACTTC 2738712 Query 17417 TCGTC--CGGTG-TAAGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCG 17473 || || || || | | |||||| | | ||| ||||| | ||| | || ||| Sbjct 2738711 TCATCCTCGTTGATCTTGTTGTTCCAGTCGTGGAGATCCTTGGAGAGATCGATCTCCTCG 2738652 Query 17474 GGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAAT 17517 | ||||| ||| ||| | ||||| || ||||| | ||| || Sbjct 2738651 GCAGTCCAGAAAGATGCCTCGGCCTTCTTGTACATTTGCCAGAT 2738608 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517544480807640