Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23]
173 sequences; 38,835,037 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq22 172 7e-38
seq3 82.4 9e-11
>seq22
Length=534521
Score = 172 bits (190), Expect = 7e-38
Identities = 478/730 (65%), Gaps = 16/730 (2%)
Strand=Plus/Minus
Query 53951 TCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 54010
|| |||||||| || | |||| | | | ||||| || || | |||||||| | | |
Sbjct 117335 TCGAACTCGTCGCCGTACACATCGGCGAGGCCAGGGCACTCGTTGGGACACATGAGAGTC 117276
Query 54011 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 54070
||||| |||| | || || || ||||| || || || |||||||| || || | ||
Sbjct 117275 CACTCGCCGTTCTTCTCGACACGCTTCATGAACAGGTCGGGAATCCAGAGGGCGAGGAAG 117216
Query 54071 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 54130
||||| | || | ||||| || || ||||| || ||||||||| | |
Sbjct 117215 AGATCACGGGCACGGATCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAACTCAAAG 117156
Query 54131 ATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCC 54190
| ||| | ||||| || || | ||| |||| | | | ||||| | ||||| || |||
Sbjct 117155 ACATCCGCGTGCCAGGGCTCGAGGTAAATGGCGAAAGCGCCAGGTCTCTTGTTGCCGCCC 117096
Query 54191 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 54250
|| || | |||||| || ||||| || | || | || ||| |||| ||| || |||||
Sbjct 117095 TGGTCGACGTATCTGGCAGTGTTGTTGAAGACACGCAGCATGGGAACAATGCCGTTGGAG 117036
Query 54251 GCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCT 54310
| ||| ||||| |||| || ||| || | ||||| || || |||||
Sbjct 117035 GTACCGTTGGTGCCGGCAATGTAGGAGCCGGTAGCACGGATGCGGTGGATGTTCAGACCA 116976
Query 54311 ATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCT 54370
|| || || ||||| || ||||| | || || || | || ||||||||||| ||
Sbjct 116975 ATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTGTCATAGATGCCGTCA 116916
Query 54371 ATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT----AGT 54426
|| ||||||||| |||||| | || || ||| ||| | ||| | || |||
Sbjct 116915 ATGCTATCATCCTTCATGTCGACAAGGAAGCAG---GACGAAAGCTGA-GCCTGGGGAGT 116860
Query 54427 TCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTA 54486
|| || || || | ||| ||||| || || || || | || || | || |||||
Sbjct 116859 ACCAGCGTTGAACAGGGTGGGAGAGGCATGTGTGAAGTACTTGCTTGACATGAGGTTGTA 116800
Query 54487 CGTCTCGATAGCTGAGTCTATATC----CCATTGATGAATTCCTACTGCGACACGCATTA 54542
||||| || | || || || || | |||| || || | |||||||| |
Sbjct 116799 AGTCTCAATGACACGCTCAATGTCGTCGCCGTGGATG----CCGACAGACACACGCATGA 116744
Query 54543 ACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCA 54602
||||||||| || | || ||||||||| ||| | || |||| ||| || || |
Sbjct 116743 TCATGTGCTGGGGACGCTCGACGATCTTGCCGTTGAGCTTGAGCAGGTATGAGCGCTCGA 116684
Query 54603 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGA 54662
|| || || ||||| || | ||| ||||| || ||||| | ||| | |||| ||
Sbjct 116683 GGGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCGCGGTCGTACACAATGGCCGAGTCGA 116624
Query 54663 GTTTATCCTT 54672
| | |||||
Sbjct 116623 GCTCGTCCTT 116614
>seq3
Length=3980562
Score = 82.4 bits (90), Expect = 9e-11
Identities = 99/135 (73%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 24149 GTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 24208
||| || |||||||| | || | |||||||| || ||||| |||||||| |||||
Sbjct 2739217 GTGGAGGCCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGAGGCC 2739158
Query 24209 ACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGC 24268
||||| || ||||| || ||||| || || | || ||||| || || || || ||
Sbjct 2739157 GCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCGCTGAAGAAGATACCCTCGACCGC 2739098
Query 24269 CGCAAAGGCAATAAG 24283
||||||||||| ||
Sbjct 2739097 AGCAAAGGCAATGAG 2739083
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593720316077040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |