Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23]
173 sequences; 38,835,037 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq3 221 1e-52
seq25 149 6e-31
seq9 141 1e-28
seq5 111 2e-19
>seq3
Length=3980562
Score = 221 bits (244), Expect = 1e-52
Identities = 325/455 (71%), Gaps = 4/455 (1%)
Strand=Plus/Plus
Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041
|||||||||| ||||| ||| |||||| ||| | | ||| | |||||| ||||||
Sbjct 2739024 AGAAGGCCGACTGGGCTCTGAAGTGGATCTCCGACCGGGAGTCTACCTTCGCTCAGCGCC 2739083
Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101
| | ||||| || || |||||||| ||||||| || |||||| |||| || |
Sbjct 2739084 TCATTGCCTTTGCTGCGGTCGAGGGTATCTTCTTCAGCGGTGCCTTCGCCTCCATCTTCT 2739143
Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161
|||||||||| |||||||||||||||||||| || ||| ||||||||||||||| | |
Sbjct 2739144 GGCTCAAGAAGCGCGGCCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCGCGTG 2739203
Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGA 117221
||||||| || || ||||||||||| | |||||| || | | | || || |
Sbjct 2739204 ACGAGGGCCTCCACACTGACTTTGCCTGCCTCCTGTTCTCCCACCTCAAGAACCGCCCCA 2739263
Query 117222 GCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCA 117281
|| | || |||| ||||||| ||| ||| || ||| ||||| ||| ||||| |
Sbjct 2739264 GCAAGAAGCTCGTCGAGGAGATCATCATCGATGCTGTCAAGATCGAACAGGAGTTCCTTA 2739323
Query 117282 CCGAAGCGCTGCCGGTGCG-TCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACAT 117339
|||| || ||||| |||| ||||| || | || | |||| | ||| ||| |||||
Sbjct 2739324 CCGAGGCTCTGCC-CTGCGCCCTGCTTGGCATGAACT-CGAACCTCATGAAGCAGTACAT 2739381
Query 117340 CGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCC 117399
|||||||||||||||| | || || ||| || | | || ||| |||| | |
Sbjct 2739382 CGAGTTCGTCGCCGACCGCCTCCTCGTCGCTCTCGGCAACGAGAAGGTCTACCGTGCCAC 2739441
Query 117400 CAACCCGCTGGACTTTATGAACCTCATCTCCTTGG 117434
|||||| | ||||| ||| | ||||||| |||
Sbjct 2739442 CAACCCCTTTGACTTCATGGAGAACATCTCCCTGG 2739476
Score = 196 bits (216), Expect = 5e-45
Identities = 218/288 (76%), Gaps = 5/288 (2%)
Strand=Plus/Plus
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695
|| |||| |||||||| ||||||||||| || |||||||| | ||||||| | || ||
Sbjct 2738608 ATCTGGCAAATGTACAAGAAGGCCGAGGCATCTTTCTGGACTGCCGAGGAGATCGATCTC 2738667
Query 116696 TCCAAGGA-CACGAGCGACTGGGAGCGCTTGA---ACGACAACGAGCGCCATTTCATCAA 116751
|||||||| | | | ||||||| | | || |||| | ||| | ||||||
Sbjct 2738668 TCCAAGGATCTCCA-CGACTGGAACAACAAGATCAACGAGGATGAGAAGTACTTCATCTC 2738726
Query 116752 GCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG 116811
|||| | |||||||| ||||||||| |||||||||||||||||||| |||||||||||
Sbjct 2738727 GCACATCCTGGCCTTCTTCGCCGCCTCGGACGGCATCGTCAACGAGAACCTGGTCGAGCG 2738786
Query 116812 TTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871
||| ||||| ||| | |||||||||| |||||||||||||| |||||| ||
Sbjct 2738787 CTTCAGCGGCGAGGTCCAGATTCCCGAGGCGCGCTGCTTCTACGGCTTCCAGATCATGAT 2738846
Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT 116919
||||||| | ||||| || | || ||| ||||| ||||| |||||
Sbjct 2738847 GGAGAACATCCACTCCGAGACCTACTCGCTGCTCATTGACACCTACGT 2738894
>seq25
Length=380168
Score = 149 bits (164), Expect = 6e-31
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || ||||| || || |||||||| | || || || | ||
Sbjct 211956 ATGCAGATCTTCGTCAAGACTCTCACTGGAAAGACCATCACTCTGGAGGTGGAGTCTTCC 212015
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | | ||| || || | ||||| |||||||| ||| ||||||||
Sbjct 212016 GACACCATCGATAATGTGAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 212075
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || ||||||| ||| ||||| ||| |||| || | |||||||| | ||||||||||
Sbjct 212076 CAGCGCCTCATCTTCGCTGGCAAGCAGTTGGAAGATGGCCGCACCCTGAGCGACTACAAC 212135
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
|||||||||||| | || |||| || ||||||||| || | || ||
Sbjct 212136 ATCCAGAAGGAGTCAACCTTGCACCTGGTGTTGCGCCTGCGTGGTGG 212182
Score = 138 bits (152), Expect = 1e-27
Identities = 158/210 (75%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| || || || || || || ||||| ||||||||| | || || ||| | |
Sbjct 212184 ATGCAAATTTTTGTCAAGACTCTTACTGGCAAGACCATCACCCTGGAAGTTGAATCGTCG 212243
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| ||||| || |||| ||||| |||||||||||| |||| ||
Sbjct 212244 GACACCATTGACAACG-TCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCCCCGGATCA 212302
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || || |||| || || || |||||||| || | ||||| || | |||||||||
Sbjct 212303 GCAGCGTCTTATCTTTGCTGGTAAGCAGCTGGAAGATGGCCGCACTCTGAGCGACTACAA 212362
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
||||||||||||| | || |||| || ||
Sbjct 212363 CATCCAGAAGGAGTCGACATTGCACCTGGT 212392
Score = 132 bits (146), Expect = 5e-26
Identities = 157/210 (75%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || || |||||||| |||||||| | || ||||| || |
Sbjct 211500 ATGCAGATCTTCGTCAAGACCCTGACGGGCAAGACCATCACTCTTGAGGTCGAGTCCTCG 211559
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| ||||| || || | ||||| ||||| ||||| | || ||
Sbjct 211560 GACACCATCGACAACG-TCAAGAGCAAGATCCAGGACAAGGAGGGTATCCCTCCCGATCA 211618
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || ||||||| ||| ||||| ||||| || |||| | || ||| |||||||||
Sbjct 211619 GCAGCGCCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGAAGAACACTCTCCGACTACAA 211678
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
||||||||||||| |||| || || || ||
Sbjct 211679 CATCCAGAAGGAGTCCACTCTCCACCTCGT 211708
Score = 104 bits (114), Expect = 2e-17
Identities = 151/211 (72%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
|||||| || ||||| || || | || ||||| ||||| || | || ||||| | |
Sbjct 211727 AATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATTACTCTTGAGGTCGAGTCGTC 211786
Query 40749 CGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807
||| | | | | |||| ||||| || || | ||||| ||||| ||||| | || |
Sbjct 211787 CGATACCATCGACAACG-TCAAGAGCAAGATCCAGGACAAGGAGGGTATCCCTCCCGATC 211845
Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867
|||| || ||||||| || ||||| ||||| || || | || ||| | |||||||
Sbjct 211846 AGCAGCGCCTCATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGTACCTTGTCTGACTACA 211905
Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
|||||||||||||| | || || ||||| ||
Sbjct 211906 ACATCCAGAAGGAGTCTACTCTCCATCTCGT 211936
>seq9
Length=1091098
Score = 141 bits (156), Expect = 1e-28
Identities = 172/232 (74%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || || |||||||| || |||||| |||| || || | ||
Sbjct 140572 ATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACTATCACCCTCGAGGTGGAGTCGTCC 140631
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | |||| ||||| || || | ||||| |||||||| ||| |||||||
Sbjct 140632 GACACTATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCA 140690
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || ||||||| ||| ||||| ||||| || || | ||||| ||| ||||||||
Sbjct 140691 GCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCTCGGACTACAA 140750
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCGGC 40920
||||||||||||| | || || || || ||| || | || | || || |||
Sbjct 140751 CATCCAGAAGGAGTCGACCCTCCACCTCGTGCTGAGACTGCGTGGTGGTGGC 140802
>seq5
Length=2741173
Score = 111 bits (122), Expect = 2e-19
Identities = 133/181 (73%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758
||||| || || || |||||||| || |||||| | || || || | |||||| | |
Sbjct 2268221 TTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTCCGACACCATC 2268280
Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818
| | ||||| || || | || || |||||||||||| |||||||||| || ||
Sbjct 2268281 GACAATGTCAAGTCCAAGATCCAGGATAAGGAGGGCATCCCCCCGGACCAGCAGCGCCTG 2268340
Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878
|||| ||| ||||| ||||| || |||| || || || ||||||||||||||||||
Sbjct 2268341 ATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGGACTCTGTCTGACTACAACATCCAGAAG 2268400
Query 40879 G 40879
|
Sbjct 2268401 G 2268401
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515218085838480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |