Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23] 173 sequences; 38,835,037 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq3 221 1e-52 seq25 149 6e-31 seq9 141 1e-28 seq5 111 2e-19 >seq3 Length=3980562 Score = 221 bits (244), Expect = 1e-52 Identities = 325/455 (71%), Gaps = 4/455 (1%) Strand=Plus/Plus Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041 |||||||||| ||||| ||| |||||| ||| | | ||| | |||||| |||||| Sbjct 2739024 AGAAGGCCGACTGGGCTCTGAAGTGGATCTCCGACCGGGAGTCTACCTTCGCTCAGCGCC 2739083 Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101 | | ||||| || || |||||||| ||||||| || |||||| |||| || | Sbjct 2739084 TCATTGCCTTTGCTGCGGTCGAGGGTATCTTCTTCAGCGGTGCCTTCGCCTCCATCTTCT 2739143 Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161 |||||||||| |||||||||||||||||||| || ||| ||||||||||||||| | | Sbjct 2739144 GGCTCAAGAAGCGCGGCCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCGCGTG 2739203 Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGA 117221 ||||||| || || ||||||||||| | |||||| || | | | || || | Sbjct 2739204 ACGAGGGCCTCCACACTGACTTTGCCTGCCTCCTGTTCTCCCACCTCAAGAACCGCCCCA 2739263 Query 117222 GCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCA 117281 || | || |||| ||||||| ||| ||| || ||| ||||| ||| ||||| | Sbjct 2739264 GCAAGAAGCTCGTCGAGGAGATCATCATCGATGCTGTCAAGATCGAACAGGAGTTCCTTA 2739323 Query 117282 CCGAAGCGCTGCCGGTGCG-TCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACAT 117339 |||| || ||||| |||| ||||| || | || | |||| | ||| ||| ||||| Sbjct 2739324 CCGAGGCTCTGCC-CTGCGCCCTGCTTGGCATGAACT-CGAACCTCATGAAGCAGTACAT 2739381 Query 117340 CGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCC 117399 |||||||||||||||| | || || ||| || | | || ||| |||| | | Sbjct 2739382 CGAGTTCGTCGCCGACCGCCTCCTCGTCGCTCTCGGCAACGAGAAGGTCTACCGTGCCAC 2739441 Query 117400 CAACCCGCTGGACTTTATGAACCTCATCTCCTTGG 117434 |||||| | ||||| ||| | ||||||| ||| Sbjct 2739442 CAACCCCTTTGACTTCATGGAGAACATCTCCCTGG 2739476 Score = 196 bits (216), Expect = 5e-45 Identities = 218/288 (76%), Gaps = 5/288 (2%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||||||||| || |||||||| | ||||||| | || || Sbjct 2738608 ATCTGGCAAATGTACAAGAAGGCCGAGGCATCTTTCTGGACTGCCGAGGAGATCGATCTC 2738667 Query 116696 TCCAAGGA-CACGAGCGACTGGGAGCGCTTGA---ACGACAACGAGCGCCATTTCATCAA 116751 |||||||| | | | ||||||| | | || |||| | ||| | |||||| Sbjct 2738668 TCCAAGGATCTCCA-CGACTGGAACAACAAGATCAACGAGGATGAGAAGTACTTCATCTC 2738726 Query 116752 GCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG 116811 |||| | |||||||| ||||||||| |||||||||||||||||||| ||||||||||| Sbjct 2738727 GCACATCCTGGCCTTCTTCGCCGCCTCGGACGGCATCGTCAACGAGAACCTGGTCGAGCG 2738786 Query 116812 TTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| ||||| ||| | |||||||||| |||||||||||||| |||||| || Sbjct 2738787 CTTCAGCGGCGAGGTCCAGATTCCCGAGGCGCGCTGCTTCTACGGCTTCCAGATCATGAT 2738846 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT 116919 ||||||| | ||||| || | || ||| ||||| ||||| ||||| Sbjct 2738847 GGAGAACATCCACTCCGAGACCTACTCGCTGCTCATTGACACCTACGT 2738894 >seq25 Length=380168 Score = 149 bits (164), Expect = 6e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| || || |||||||| | || || || | || Sbjct 211956 ATGCAGATCTTCGTCAAGACTCTCACTGGAAAGACCATCACTCTGGAGGTGGAGTCTTCC 212015 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | | ||| || || | ||||| |||||||| ||| |||||||| Sbjct 212016 GACACCATCGATAATGTGAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 212075 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || ||||||| ||| ||||| ||| |||| || | |||||||| | |||||||||| Sbjct 212076 CAGCGCCTCATCTTCGCTGGCAAGCAGTTGGAAGATGGCCGCACCCTGAGCGACTACAAC 212135 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| | || |||| || ||||||||| || | || || Sbjct 212136 ATCCAGAAGGAGTCAACCTTGCACCTGGTGTTGCGCCTGCGTGGTGG 212182 Score = 138 bits (152), Expect = 1e-27 Identities = 158/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || || || ||||| ||||||||| | || || ||| | | Sbjct 212184 ATGCAAATTTTTGTCAAGACTCTTACTGGCAAGACCATCACCCTGGAAGTTGAATCGTCG 212243 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| ||||| || |||| ||||| |||||||||||| |||| || Sbjct 212244 GACACCATTGACAACG-TCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCCCCGGATCA 212302 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| || || || |||||||| || | ||||| || | ||||||||| Sbjct 212303 GCAGCGTCTTATCTTTGCTGGTAAGCAGCTGGAAGATGGCCGCACTCTGAGCGACTACAA 212362 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| | || |||| || || Sbjct 212363 CATCCAGAAGGAGTCGACATTGCACCTGGT 212392 Score = 132 bits (146), Expect = 5e-26 Identities = 157/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || |||||||| |||||||| | || ||||| || | Sbjct 211500 ATGCAGATCTTCGTCAAGACCCTGACGGGCAAGACCATCACTCTTGAGGTCGAGTCCTCG 211559 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| ||||| || || | ||||| ||||| ||||| | || || Sbjct 211560 GACACCATCGACAACG-TCAAGAGCAAGATCCAGGACAAGGAGGGTATCCCTCCCGATCA 211618 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| ||||| ||||| || |||| | || ||| ||||||||| Sbjct 211619 GCAGCGCCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGAAGAACACTCTCCGACTACAA 211678 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| |||| || || || || Sbjct 211679 CATCCAGAAGGAGTCCACTCTCCACCTCGT 211708 Score = 104 bits (114), Expect = 2e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || ||||| || || | || ||||| ||||| || | || ||||| | | Sbjct 211727 AATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATTACTCTTGAGGTCGAGTCGTC 211786 Query 40749 CGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 ||| | | | | |||| ||||| || || | ||||| ||||| ||||| | || | Sbjct 211787 CGATACCATCGACAACG-TCAAGAGCAAGATCCAGGACAAGGAGGGTATCCCTCCCGATC 211845 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 |||| || ||||||| || ||||| ||||| || || | || ||| | ||||||| Sbjct 211846 AGCAGCGCCTCATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGTACCTTGTCTGACTACA 211905 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||||| | || || ||||| || Sbjct 211906 ACATCCAGAAGGAGTCTACTCTCCATCTCGT 211936 >seq9 Length=1091098 Score = 141 bits (156), Expect = 1e-28 Identities = 172/232 (74%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || |||||||| || |||||| |||| || || | || Sbjct 140572 ATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACTATCACCCTCGAGGTGGAGTCGTCC 140631 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| ||||| || || | ||||| |||||||| ||| ||||||| Sbjct 140632 GACACTATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCA 140690 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| ||||| ||||| || || | ||||| ||| |||||||| Sbjct 140691 GCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCTCGGACTACAA 140750 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCGGC 40920 ||||||||||||| | || || || || ||| || | || | || || ||| Sbjct 140751 CATCCAGAAGGAGTCGACCCTCCACCTCGTGCTGAGACTGCGTGGTGGTGGC 140802 >seq5 Length=2741173 Score = 111 bits (122), Expect = 2e-19 Identities = 133/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || || |||||||| || |||||| | || || || | |||||| | | Sbjct 2268221 TTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTCCGACACCATC 2268280 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | ||||| || || | || || |||||||||||| |||||||||| || || Sbjct 2268281 GACAATGTCAAGTCCAAGATCCAGGATAAGGAGGGCATCCCCCCGGACCAGCAGCGCCTG 2268340 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 |||| ||| ||||| ||||| || |||| || || || |||||||||||||||||| Sbjct 2268341 ATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGGACTCTGTCTGACTACAACATCCAGAAG 2268400 Query 40879 G 40879 | Sbjct 2268401 G 2268401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515218085838480