Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23] 173 sequences; 38,835,037 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq25 134 1e-26 seq9 129 5e-25 >seq25 Length=380168 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| ||| | ||| ||||| || || |||||||| ||||||| |||||| ||| || Sbjct 212392 ACCAGGTGCAATGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCTTCC 212333 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || ||||| |||| |||||||||||||| || || |||||||||||||| | Sbjct 212332 AGCTGCTTACCAGCAAAGATAAGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGA 212273 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | || | |||||||| || || || | ||| | || ||| Sbjct 212272 ATCTTGGACTTGACGTTGTCAATGGTGTCCGACGATTCAACTTCCAGGGTGATGGTCTTG 212213 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || ||||| || |||||||| ||||| Sbjct 212212 CCAGTAAGAGTCTTGACAAAAATTTGCAT 212184 Score = 129 bits (142), Expect = 5e-25 Identities = 154/207 (74%), Gaps = 4/207 (2%) Strand=Plus/Minus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTA--TCCTCGAGC 118592 ||||| || ||||| || || |||||||| ||| | |||| | | ||||||||| Sbjct 211703 GTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGG--AGAGTGTTCTTCCGTCCTCGAGC 211646 Query 118593 TGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATT 118652 || || |||||| ||||||| ||||||||||||||||| || ||||||||||| || Sbjct 211645 TGCTTGCCAGCGAAGATGAGGCGCTGCTGATCGGGAGGGATACCCTCCTTGTCCTGGATC 211586 Query 118653 TTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCG 118712 || || || | |||| |||||||| | ||||||||| | || | || ||||| Sbjct 211585 TTGCTCTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCAAGAGTGATGGTCTTGCCC 211526 Query 118713 GTCAGAGTTTTTACAAAAATCTGCATG 118739 ||||| || || || || ||||||||| Sbjct 211525 GTCAGGGTCTTGACGAAGATCTGCATG 211499 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || || | | |||||||| ||| | || ||||| || || |||||||| |||| Sbjct 212184 TACCACCACGCAGGCGCAACACCAGGTGCAAGGTTGACTCCTTCTGGATGTTGTAGTCGC 212125 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 ||| ||||| ||| || | ||| || |||||| ||||||| |||||||| || || | Sbjct 212124 TCAGGGTGCGGCCATCTTCCAACTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGGG 212065 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | |||||||||||||| || || || || | |||| |||||| | ||| | Sbjct 212064 GAATGCCCTCCTTGTCCTGGATCTTGGACTTCACATTATCGATGGTGTCGGAAGACTCCA 212005 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| | || | || || || || ||||| || || || |||||||| Sbjct 212004 CCTCCAGAGTGATGGTCTTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 211956 Score = 118 bits (130), Expect = 9e-22 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595 |||| |||||||| || || |||||||| || || || || |||||||||||| Sbjct 211930 TGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGACAAGGTACGGCCATCCTCGAGCTGC 211871 Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655 || ||||| ||||||| ||||||||||||||||| || ||||||||||| || || Sbjct 211870 TTGCCAGCAAAGATGAGGCGCTGCTGATCGGGAGGGATACCCTCCTTGTCCTGGATCTTG 211811 Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715 || || | |||| ||| || | ||||||||| | || | || ||||||||| Sbjct 211810 CTCTTGACGTTGTCGATGGTATCGGACGACTCGACCTCAAGAGTAATGGTCTTGCCGGTC 211751 Query 118716 AGAGTTTTTACAAAAATCTGCAT 118738 | || || || || |||||||| Sbjct 211750 AAGGTCTTGACGAAGATCTGCAT 211728 >seq9 Length=1091098 Score = 129 bits (142), Expect = 5e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570 ||| || || | ||||| ||| | ||||| || ||||| || || |||||||| || Sbjct 140799 ACCACCACGCAGTCTCAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 140740 Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630 | |||||| |||||||||||| || || ||| ||||||| |||||||| || || || Sbjct 140739 GAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGG 140680 Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690 |||||||||||||| || || || || | |||| ||||| | ||| || Sbjct 140679 AATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCGGACGACTCCAC 140620 Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 ||||| ||| | || ||||| ||||| || || || || ||||||||| Sbjct 140619 CTCGAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCATG 140571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433829485295716