Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23] 173 sequences; 38,835,037 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq22 340 2e-88 seq3 138 1e-27 seq25 125 6e-24 seq9 120 3e-22 seq5 86.0 6e-12 >seq22 Length=534521 Score = 340 bits (376), Expect = 2e-88 Identities = 678/997 (68%), Gaps = 7/997 (1%) Strand=Plus/Minus Query 22982 AAGTCGTAAACGCCCGA-TTGTA--CAACAAACTTGTTGACGGCGATCGAGGCAAGATTG 23038 |||||||| ||| || ||||| |||| |||| | | || | || || | |||| Sbjct 117623 AAGTCGTAGACGGCCTCGTTGTAGTCAACGAACTGGGGCAGAGCCAGGGAAGCCAAATTG 117564 Query 23039 CATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACAC 23098 || || || ||||| || || | |||||| | || || || || || ||| | Sbjct 117563 CAGACAGCGACCTCATCGGGGGCAGAGTACTCGATGATCTCAGTGCAGAGGTTGGAGCTG 117504 Query 23099 TTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATG 23158 || || ||||| || |||||||||| || || ||| | |||||||||||||||| Sbjct 117503 CGGATGGTTCCCAAGTTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCCTTGTAGAGCATG 117444 Query 23159 TACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGA 23218 | || | || ||||| ||| | ||||| ||| || ||||| |||| || | Sbjct 117443 AAAGGGTTACCGGTCTCAGTCTGAGCCTCGAGGATGGCGTACCACAGCTTCTGGGCCTTG 117384 Query 23219 ACACGTCGCACGTACCTG-CCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGC 23277 | | || ||| | | || || |||||||||| | ||||| || || || ||| | Sbjct 117383 AT-CTTCTGACGACCACGACCCTCGGCCTCGTACTTCTCGTACAGAGCCTCGAACTCGTC 117325 Query 23278 ACCGTA-ACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGT 23336 ||||| ||| ||||| ||||| || | | | |||||||||||| ||||| || Sbjct 117324 GCCGTACACA-TCGGCGAGGCCAGGGCACTCGTTGGGACACATGAGAGTCCACTCGCCGT 117266 Query 23337 CATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGG 23396 || || || || |||| || || || || ||||| || ||| ||| || || |||| Sbjct 117265 TCTTCTCGACACGCTTCATGAACAGGTCGGGAATCCAGAGGGCGAGGAAGAGATCACGGG 117206 Query 23397 CGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCAT 23456 | || | |||||| |||||| |||||| | || | || || || || ||||| | Sbjct 117205 CACGGATCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAACTCAAAGACATCCGCGT 117146 Query 23457 GCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGT 23516 |||| ||||||||||||| ||| || ||||| |||||||| ||||||||||| ||||||| Sbjct 117145 GCCAGGGCTCGAGGTAAATGGCGAAAGCGCCAGGTCTCTTGTTGCCGCCCTGGTCGACGT 117086 Query 23517 AACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTA 23576 | | ||| ||||||||| | || | ||||| || || | |||||||| | ||| Sbjct 117085 ATCTGGCAGTGTTGTTGAAGACACGCAGCATGGGAACAATGCCGTTGGAGGTACCGTTGG 117026 Query 23577 CGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGC 23636 ||| || | || || | || || | | ||| | || | ||| || || || Sbjct 117025 TGCCGGCAATGTAGGAGCCGGTAGCACGGATGCGGTGGATGTTCAGACCAATACCACCAG 116966 Query 23637 CCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCT 23696 || || || ||||| || || || |||||||| |||||||| || ||||| || | Sbjct 116965 CCATCTTGGAGATCATGGCACAGGTCTTGAGAGTGTCATAGATGCCGTCAATGCTATCAT 116906 Query 23697 CTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACA 23756 | || | |||| | ||| || || || | || || | ||| ||| | || ||||| Sbjct 116905 CCTTCATGTCGACAAGGAAGCAGGACGAAAGCTGAGCCTGGGGAGTACCAGCGTTGAACA 116846 Query 23757 GTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGG 23816 | || || ||| || || ||||| | ||||| || ||||| || || ||| | Sbjct 116845 GGGTGGGAGAGGCATGTGTGAAGTACTTGCTTGACATGAGGTTGTAAGTCTCAATGACAC 116786 Query 23817 CATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCT 23876 |||||||| || ||||| || |||| | || ||||| ||||||| || || | || Sbjct 116785 GCTCAATGTCGTCGCCGTGGATGCCGACAGACACACGCATGATCATGTGCTGGGGACGCT 116726 Query 23877 CGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAAT 23936 |||| | |||||| | |||| ||| ||||| || | | || || || ||||| | Sbjct 116725 CGACGATCTTGCCGTTGAGCTTGAGCAGGTATGAGCGCTCGAGGGTCTTGAAGCCAAAGT 116666 Query 23937 AGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGA 23973 | | ||||| ||||| || |||| ||| |||||||| Sbjct 116665 ACTGGTAGTTGAAGTCGCGGTCGTACACAATGGCCGA 116629 >seq3 Length=3980562 Score = 138 bits (152), Expect = 1e-27 Identities = 297/440 (68%), Gaps = 12/440 (3%) Strand=Plus/Plus Query 57960 ACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGC 58019 || ||||| || | || || || || || || ||||| ||||| ||||| || | Sbjct 2739068 ACCTTCGCTCAGCGCCTCATTGCCTTTGCTGCGGTCGAGGGTATCTTCTTCAGCGGTGCC 2739127 Query 58020 TTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAAC 58079 || || | || || ||| | ||||| |||||||| ||||||||||| || || |||| Sbjct 2739128 TTCGCCTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTCACCTTCTCCAAC 2739187 Query 58080 GAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCAC 58139 ||| | || ||||| |||||||| ||||| ||||| ||||| ||||| ||| ||| ||| Sbjct 2739188 GAGCTCATCTCGCGTGACGAGGGCCTCCACACTGACTTTGCCTGCCTCCTGTTCTCCCAC 2739247 Query 58140 ATTGTCAATAAACCGACGC----GGGATCGCATCTTGGACATTATCACCGAGGCGGTCGC 58195 |||| ||||| | | | | | | || ||| || |||| ||| || ||| Sbjct 2739248 ---CTCAA-GAACCGCCCCAGCAAGAAGCTCGTCGAGGAGATCATCATCGATGCTGTCAA 2739303 Query 58196 GATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGA 58255 ||||||| | ||||| | ||||| || || || ||| |||| || |||||| | Sbjct 2739304 GATCGAACAGGAGTTCCTTACCGAGGCTCTGCCCTGCGCCCTGCTTGGCATGAACTCGAA 2739363 Query 58256 TTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACT--GATTGGA 58313 | ||| ||||||| ||||| || |||||| | || | ||| || | || Sbjct 2739364 CCTCATGAAGCAGTACATCGAGTTCGTCGCCGACCGCCTCCTCGTCGCTCTCGGCAACGA 2739423 Query 58314 GAGCGTCATTACAACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGC 58373 || ||| ||| | | || || ||||| || ||| | ||||| || | ||| Sbjct 2739424 GAAGGTC--TACCGTGCCACCAACCCCTTTGACTTCATGGAGAACATCTCCCTGGGCGGC 2739481 Query 58374 AAGACAAACTTTTTCGAAAA 58393 ||||| ||||| ||||| || Sbjct 2739482 AAGACCAACTTCTTCGAGAA 2739501 >seq25 Length=380168 Score = 125 bits (138), Expect = 6e-24 Identities = 175/243 (72%), Gaps = 2/243 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| || |||||||| || ||||| || |||||| | || |||||| |||| Sbjct 212184 ATGCAAATTTTTGTCAAGACTCTTACTGGCAAGACCATCACCCTGGAAGTTGAATCGTCG 212243 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | ||||| | || ||||||||| ||| | || || || ||| Sbjct 212244 GACACCATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCCCCGGATCAG 212303 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || || ||||| || ||| ||||||| ||| ||||||| || ||| Sbjct 212304 CAGCGTCTTATCTTTGCTGGTAAGCAGCTGGAAGATGGCCGCACTCTGAGCGACTACAAC 212363 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT-AG-AAGCGGTG 31430 || || || || ||||| | || ||||| || | ||| | || ||| || |||| | | Sbjct 212364 ATCCAGAAGGAGTCGACATTGCACCTGGTCCTCCGTCTGCGTGGTGGTCAGTAAGCCGCG 212423 Query 31431 ACG 31433 ||| Sbjct 212424 ACG 212426 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| |||||||| || || || || ||||| | || || || | ||| Sbjct 211956 ATGCAGATCTTCGTCAAGACTCTCACTGGAAAGACCATCACTCTGGAGGTGGAGTCTTCC 212015 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || | || ||||||||| ||| | || || |||||| Sbjct 212016 GACACCATCGATAATGTGAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 212075 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || ||||||||||| ||||||||||| || ||||||| || ||| Sbjct 212076 CAGCGCCTCATCTTCGCTGGCAAGCAGTTGGAAGATGGCCGCACCCTGAGCGACTACAAC 212135 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGT 31401 || || || || || || | || ||||| Sbjct 212136 ATCCAGAAGGAGTCAACCTTGCACCTGGT 212164 Score = 93.3 bits (102), Expect = 4e-14 Identities = 152/216 (70%), Gaps = 6/216 (3%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| ||||| ||||| || ||||| | || || || | || Sbjct 211499 CATGCAGATCTTCGTCAAGACCCTGACGGGCAAGACCATCACTCTTGAGGTCGAGTCCTC 211558 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAG-AATAGC--GGACAAGGAAGGCGTGCCGCCCGA 31308 |||| |||| | ||||| ||| || | | ||||||||| || | || ||||| Sbjct 211559 GGACACCATCGACAACGTCAA---GAGCAAGATCCAGGACAAGGAGGGTATCCCTCCCGA 211615 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368 |||||||| || || ||||||||||| ||| | || ||| | || | ||| || Sbjct 211616 TCAGCAGCGCCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGAAGAACACTCTCCGACTA 211675 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || || || ||||| || || || || Sbjct 211676 CAACATCCAGAAGGAGTCCACTCTCCACCTCGTCCT 211711 >seq9 Length=1091098 Score = 120 bits (132), Expect = 3e-22 Identities = 173/244 (71%), Gaps = 4/244 (2%) Strand=Plus/Plus Query 31188 CAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAAC 31247 ||| |||||| || ||||| ||||| ||||| ||||| || |||||| |||| || || Sbjct 140567 CAATCATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACTATCACCCTCGAGGTGGAGT 140626 Query 31248 CGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307 ||||||||| | |||| | ||||| | || ||||||||| ||| | || || | Sbjct 140627 CGTCCGACACTATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGG 140686 Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATT 31367 |||||||||| || || ||||| ||||| ||| | || || ||| | || | Sbjct 140687 ACCAGCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCTCGGACT 140746 Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT----AGA 31423 | ||||| || || || ||||| || || || || || |||||| | || ||| ||| Sbjct 140747 ACAACATCCAGAAGGAGTCGACCCTCCACCTCGTGCTGAGACTGCGTGGTGGTGGCAAGA 140806 Query 31424 AGCG 31427 |||| Sbjct 140807 AGCG 140810 >seq5 Length=2741173 Score = 86.0 bits (94), Expect = 6e-12 Identities = 107/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 31202 TTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTC 31261 ||||| ||||| ||||| ||||| || |||||| | || || || ||||||||| || Sbjct 2268221 TTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTCCGACACCATC 2268280 Query 31262 GAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTA 31321 || | ||||| | || ||| ||||| ||| | || || ||||||||||| || Sbjct 2268281 GACAATGTCAAGTCCAAGATCCAGGATAAGGAGGGCATCCCCCCGGACCAGCAGCGCCTG 2268340 Query 31322 ATATTCGCTGGCAAACAGTTGGAAGAC 31348 || ||||| ||||| ||| | || ||| Sbjct 2268341 ATCTTCGCCGGCAAGCAGCTTGAGGAC 2268367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445765436030160