Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23] 173 sequences; 38,835,037 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq22 138 2e-27 seq3 116 7e-21 >seq22 Length=534521 Score = 138 bits (152), Expect = 2e-27 Identities = 181/251 (72%), Gaps = 0/251 (0%) Strand=Plus/Minus Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851 || ||||| |||||||||| || || ||| ||||| ||||| || || |||||| Sbjct 116972 CCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTGTCATAGATGCCGTCAATG 116913 Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTTCCACAA 94911 |||||||| | | | | | ||||||||| || ||||| || | | || ||| Sbjct 116912 CTATCATCCTTCATGTCGACAAGGAAGCAGGACGAAAGCTGAGCCTGGGGAGTACCAGCG 116853 Query 94912 TTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTCA 94971 || ||||| ||||| || ||||| || || || | || |||||||| | || || ||| Sbjct 116852 TTGAACAGGGTGGGAGAGGCATGTGTGAAGTACTTGCTTGACATGAGGTTGTAAGTCTCA 116793 Query 94972 ATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCTGA 95031 |||||| | ||||| ||||| |||||||||| ||||||||| ||||||| ||| Sbjct 116792 ATGACACGCTCAATGTCGTCGCCGTGGATGCCGACAGACACACGCATGATCATGTGCTGG 116733 Query 95032 GGGCGCTCAAC 95042 || ||||| || Sbjct 116732 GGACGCTCGAC 116722 >seq3 Length=3980562 Score = 116 bits (128), Expect = 7e-21 Identities = 118/154 (77%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 101919 TTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGGA 101978 ||||||||||||| || || || |||||||| || ||||| ||||| ||||| |||||| Sbjct 2739087 TTGCCTTTGCTGCGGTCGAGGGTATCTTCTTCAGCGGTGCCTTCGCCTCCATCTTCTGGC 2739146 Query 101979 TCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGACG 102038 ||||||| | || | |||| || ||||||| |||||| ||| |||| || | |||| Sbjct 2739147 TCAAGAAGCGCGGCCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCGCGTGACG 2739206 Query 102039 AAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072 | || || || |||||||| ||| | ||||| Sbjct 2739207 AGGGCCTCCACACTGACTTTGCCTGCCTCCTGTT 2739240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989581806525215