Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23]
173 sequences; 38,835,037 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq22 176 6e-39
seq3 98.7 1e-15
>seq22
Length=534521
Score = 176 bits (194), Expect = 6e-39
Identities = 475/726 (65%), Gaps = 8/726 (1%)
Strand=Plus/Minus
Query 63189 TCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGAC 63248
||||||||||| || | |||| | | | | ||| || || | |||||||| | | |
Sbjct 117335 TCGAACTCGTCGCCGTACACATCGGCGAGGCCAGGGCACTCGTTGGGACACATGAGAGTC 117276
Query 63249 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63308
||||| |||| | || || || ||||| || || || |||||||| || || | ||
Sbjct 117275 CACTCGCCGTTCTTCTCGACACGCTTCATGAACAGGTCGGGAATCCAGAGGGCGAGGAAG 117216
Query 63309 AGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63368
||||| | | | ||||| || || ||||| || ||||||||| | |
Sbjct 117215 AGATCACGGGCACGGATCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAACTCAAAG 117156
Query 63369 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63428
| ||| | ||||| || || | ||| ||||| | | | ||||| | ||||| || |||
Sbjct 117155 ACATCCGCGTGCCAGGGCTCGAGGTAAATGGCGAAAGCGCCAGGTCTCTTGTTGCCGCCC 117096
Query 63429 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGAT 63488
|| || | |||||| || ||||| || | || | || ||| |||| ||| ||||| ||
Sbjct 117095 TGGTCGACGTATCTGGCAGTGTTGTTGAAGACACGCAGCATGGGAACAATGCCGTTGGAG 117036
Query 63489 ATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCT 63548
|||| ||||| |||| || ||| || | ||||| || || |||||
Sbjct 117035 GTACCGTTGGTGCCGGCAATGTAGGAGCCGGTAGCACGGATGCGGTGGATGTTCAGACCA 116976
Query 63549 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCT 63608
|| || || ||||| || ||||| | || || || | |||||||||||||| ||
Sbjct 116975 ATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTGTCATAGATGCCGTCA 116916
Query 63609 ATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCC 63668
||||||||||| |||||| | || || ||| || | || | | ||| ||
Sbjct 116915 ATGCTATCATCCTTCATGTCGACAAGGAAGCAGGACGAAAGCTGAGCCTGGGGAGTACCA 116856
Query 63669 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTC 63728
|| || || | ||| ||||| || || || || | || || | || ||||| |||
Sbjct 116855 GCGTTGAACAGGGTGGGAGAGGCATGTGTGAAGTACTTGCTTGACATGAGGTTGTAAGTC 116796
Query 63729 TCAATAGCTGAGTCTATATC----CCATTGATGAATTCCTACTGCGACACGCATTAACAT 63784
||||| | || || || || | |||| || || | |||||||| | |||
Sbjct 116795 TCAATGACACGCTCAATGTCGTCGCCGTGGATG----CCGACAGACACACGCATGATCAT 116740
Query 63785 GTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGT 63844
|||||| || | || || || ||| ||| | || | || ||| || || | ||
Sbjct 116739 GTGCTGGGGACGCTCGACGATCTTGCCGTTGAGCTTGAGCAGGTATGAGCGCTCGAGGGT 116680
Query 63845 TTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTT 63904
|| || ||||| || | ||| ||||| || ||||| | ||| |||| | |||||
Sbjct 116679 CTTGAAGCCAAAGTACTGGTAGTTGAAGTCGCGGTCGTACACAATGGCCGAGTCGAGCTC 116620
Query 63905 ATCCTT 63910
|||||
Sbjct 116619 GTCCTT 116614
>seq3
Length=3980562
Score = 98.7 bits (108), Expect = 1e-15
Identities = 139/195 (71%), Gaps = 3/195 (2%)
Strand=Plus/Minus
Query 33596 GTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCC 33655
||| || |||||||| | || | ||||| || || ||||| |||||||| |||||
Sbjct 2739217 GTGGAGGCCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGAGGCC 2739158
Query 33656 ACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGC 33715
||||| || ||||| || ||||| ||||| | ||| |||||||| || || || ||
Sbjct 2739157 GCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCGCTGAAGAAGATACCCTCGACCGC 2739098
Query 33716 AGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTATCCACTTTTGAGC 33772
|||||||||||| || | || | | | | | ||| |||||||| ||||
Sbjct 2739097 AGCAAAGGCAATGAGGCGCTGAGCGAAGGTAGACTCCCGGTCGGAGATCCACTTCAGAGC 2739038
Query 33773 CCAATCGGCCTTCTT 33787
||| |||||||||||
Sbjct 2739037 CCAGTCGGCCTTCTT 2739023
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629816238019440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |