Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23]
173 sequences; 38,835,037 total letters
Query= NC_003401.1
Length=133719
Score E
Sequences producing significant alignments: (Bits) Value
seq2 93.3 4e-14
>seq2
Length=4043926
Score = 93.3 bits (102), Expect = 4e-14
Identities = 251/370 (68%), Gaps = 18/370 (5%)
Strand=Plus/Plus
Query 21110 CACGTAAAACTGACACAAA-ACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGG 21168
|||||| || || | |||| | ||| || || || || |||||| | ||||| || |
Sbjct 1046185 CACGTAGAATTG-CGCAAACATGTGGCATGGCGGCAGCGCCATCTTCTTCAGGTCTGCAG 1046243
Query 21169 GGTTCCACGCGCACATAACGATGCGCCGATCGTG-GGGCCGCCTGTTAATTAGATCCACC 21227
|||||||||||| ||| | ||| || || |||| ||| | | | | | | | ||||
Sbjct 1046244 GGTTCCACGCGCTCATGATGATCCGGCGGTCGTACGGGTTGTTTTTGAGCTTG-TGCACC 1046302
Query 21228 ACGTAACGC-AGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTC 21286
|| | ||| |||||||| || || || || ||| | | | ||| | || ||
Sbjct 1046303 ACCTC-CGCGAGCTGGTCGACGCCTTGCCCTGTGTAATCCGTCTTGGCGTCGACATATTC 1046361
Query 21287 CGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGC---CCTCGCGGCG 21343
|||||||||||| | |||||||||||| ||||| || ||||| |||| |||||||| |
Sbjct 1046362 CGCCCCAAAATGCCGCCACTGGAACCCATACACAGGGCCCAGGTCGCCGACCTCGCGGTG 1046421
Query 21344 GTCCCCGA-AGCCCTGCGCCG-CCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAATTTTT 21401
||| || || | | | | | || |||||||||||| | ||||| || ||
Sbjct 1046422 -----CGACAGTCCCACACTGTCGAGGAACTCGCGGGACCCGTTGCCATCCCAGATCTTG 1046476
Query 21402 ACG-CCGCGGCGCGACAGTTCGGTGGAGTCGGTGGAGCCCCTGATAAACCACAGCAACTC 21460
||| |||| || || || |||| |||| ||||| || ||||| || | |||
Sbjct 1046477 ACGCCCGCTTCG-GAGAGGGGCAAGGAGGAGGTGCAGCCCTCGACGAACCAGAGGAGCTC 1046535
Query 21461 CTCCACGACG 21470
| ||||||
Sbjct 1046536 GGCGACGACG 1046545
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427775098061040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |