Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23] 173 sequences; 38,835,037 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq22 199 6e-46 >seq22 Length=534521 Score = 199 bits (220), Expect = 6e-46 Identities = 484/730 (66%), Gaps = 16/730 (2%) Strand=Plus/Minus Query 79861 TCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGAC 79920 ||||||||||| || | |||||| | | ||||| || |||| |||||||| | | | Sbjct 117335 TCGAACTCGTCGCCGTACACATCGGCGAGGCCAGGGCACTCGTTGGGACACATGAGAGTC 117276 Query 79921 CACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 79980 ||||| || | | || || || ||||| || || || |||||||| || || | || Sbjct 117275 CACTCGCCGTTCTTCTCGACACGCTTCATGAACAGGTCGGGAATCCAGAGGGCGAGGAAG 117216 Query 79981 AGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 80040 ||||| | || | |||||| || || ||||| || ||||||||| | | Sbjct 117215 AGATCACGGGCACGGATCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAACTCAAAG 117156 Query 80041 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCC 80100 | ||| | ||||| || || | ||| ||||| | | | || |||| ||||| || ||| Sbjct 117155 ACATCCGCGTGCCAGGGCTCGAGGTAAATGGCGAAAGCGCCAGGTCTCTTGTTGCCGCCC 117096 Query 80101 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 80160 || || | |||||| || ||||| || | || | || ||| |||| ||| || ||||| Sbjct 117095 TGGTCGACGTATCTGGCAGTGTTGTTGAAGACACGCAGCATGGGAACAATGCCGTTGGAG 117036 Query 80161 GTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCT 80220 ||||| ||||| |||| || ||| || | ||||| || || ||||| Sbjct 117035 GTACCGTTGGTGCCGGCAATGTAGGAGCCGGTAGCACGGATGCGGTGGATGTTCAGACCA 116976 Query 80221 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCT 80280 || || || ||||| || ||||| | || || || | || ||||||||||| || Sbjct 116975 ATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTGTCATAGATGCCGTCA 116916 Query 80281 ATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT----AGT 80336 ||||||||||| |||||| | || || ||| ||| | ||| | || ||| Sbjct 116915 ATGCTATCATCCTTCATGTCGACAAGGAAGCAG---GACGAAAGCTGA-GCCTGGGGAGT 116860 Query 80337 TCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTA 80396 || || || || | ||| ||||| || || || || | || |||| || ||||| Sbjct 116859 ACCAGCGTTGAACAGGGTGGGAGAGGCATGTGTGAAGTACTTGCTTGACATGAGGTTGTA 116800 Query 80397 CGTCTCAATAGCTGATTCTATATC----CCATTGATGAATTCCTACCGCGACACGCATTA 80452 |||||||| | || || || || | |||| || || | |||||||| | Sbjct 116799 AGTCTCAATGACACGCTCAATGTCGTCGCCGTGGATG----CCGACAGACACACGCATGA 116744 Query 80453 ACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCA 80512 ||||||||| || | || ||||||||| || | || | || ||| || || | Sbjct 116743 TCATGTGCTGGGGACGCTCGACGATCTTGCCGTTGAGCTTGAGCAGGTATGAGCGCTCGA 116684 Query 80513 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGA 80572 || || || ||||| || | ||| ||||| || ||||| | ||| |||||| || Sbjct 116683 GGGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCGCGGTCGTACACAATGGCCGAGTCGA 116624 Query 80573 GTTTATCCTT 80582 | | ||||| Sbjct 116623 GCTCGTCCTT 116614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718267246743720