Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23]
173 sequences; 38,835,037 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq22 165 1e-35
seq3 143 4e-29
>seq22
Length=534521
Score = 165 bits (182), Expect = 1e-35
Identities = 351/519 (68%), Gaps = 4/519 (1%)
Strand=Plus/Plus
Query 96865 GATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTT 96924
||||||| ||||||||||| || | || |||||| | ||| | ||| | || || |
Sbjct 117083 GATACGTCGACCAGGGCGGCAACAAGAGACCTGGCGCTTTCGCCATTTACCTCGAGCCCT 117142
Query 96925 GGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCAC 96984
|||||||||| || ||||| || |||| | ||||| ||| ||| || ||| |
Sbjct 117143 GGCACGCGGATGTCTTTGAGTTCCTCGACCTCCGCAAGAACCACGGCAAGGAGGAGATCC 117202
Query 96985 GAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACG 97044
| ||| | || | || || |||||| | || || ||||||||||||| ||| |
Sbjct 117203 GTGCCCGTGATCTCTTCCTCGCCCTCTGGATTCCCGACCTGTTCATGAAGCGTGTCGAGA 117262
Query 97045 ACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGG 97104
| ||| | |||| || ||||| ||| || || || || || ||||| | |
Sbjct 117263 AGAACGGCGAGTGGACTCTCATGTGTCCCAACGAGTGCCCTGGCCTCGCCGATGTGTACG 117322
Query 97105 GCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGACGA 97163
|||| ||||| ||||| |||| | |||||| ||||| || ||| ||| ||
Sbjct 117323 GCGACGAGTTCGAGGCTCTGTACGAGAAGTACGAGGCCGAGGGTCGTGGTCGTCAGAAGA 117382
Query 97164 GTCGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCC 97222
|| | || | |||| |||||| | |||||| | ||||||| ||||| || | ||
Sbjct 117383 -TCAAGGC-CCAGAAGCTGTGGTACGCCATCCTCGAGGCTCAGACTGAGACCGGTAACCC 117440
Query 97223 GTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCAT 97282
| ||| |||||||||||| | | || ||||| |||||||| ||||||| |||||
Sbjct 117441 TTTCATGCTCTACAAGGATGCTGCCAACCGCAAGAGCAACCAGAAGAACTTGGGAACCAT 117500
Query 97283 CAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGT 97342
| ||||||| || ||||| || || | |||||| | | || || ||| || ||
Sbjct 117501 CCGCAGCTCCAACCTCTGCACTGAGATCATCGAGTACTCTGCCCCCGATGAGGTCGCTGT 117560
Query 97343 TTGCGTTCTGGCATCGGTCAATCTGCCCAAGTTTGTAGA 97381
||| | |||| || | ||||||| |||| || ||
Sbjct 117561 CTGCAATTTGGCTTCCCTGGCTCTGCCCCAGTTCGTTGA 117599
>seq3
Length=3980562
Score = 143 bits (158), Expect = 4e-29
Identities = 301/445 (68%), Gaps = 23/445 (5%)
Strand=Plus/Plus
Query 125433 GCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTC 125492
|| || || || || ||||| |||||||| ||| || || ||||||| ||||||
Sbjct 2739089 GCCTTTGCTGCGGTCGAGGGTATCTTCTTCAGCGGTGCCTTCGCCTCCATCTTCTGGCTC 2739148
Query 125493 AAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAG 125552
||||||||||| ||||||||||| || || | |||||| | || || || ||||||
Sbjct 2739149 AAGAAGCGCGGCCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCGCGTGACGAG 2739208
Query 125553 GGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACTATCTGCGTCCCGAGTGCAG 125611
||||| ||| |||||||||| || ||||| || || || | || | |
Sbjct 2739209 GGCCTCCACACTGACTTTGCCTGCCTCCTGTTCTCCCACCT----------CAAGAACCG 2739258
Query 125612 ATCCAGCGATGAAAAGGTCATC---AACATTGTAACCGATGCCGTGAGGATAGAACAAGA 125668
||||| | ||| || || | || | | |||||| || | ||| ||||| ||
Sbjct 2739259 CCCCAGC---AAGAAGCTCGTCGAGGAGATCATCATCGATGCTGTCAAGATCGAACAGGA 2739315
Query 125669 GTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGA 125728
||| || ||||| | || || | | || |||||||||||| || || ||| |
Sbjct 2739316 GTTCCTTACCGAGGCTCTGCCCTGCGCCCTGCTTGGCATGAACTCGAACCTCATGAAGCA 2739375
Query 125729 GTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGC--CG-CAAGATTTA 125785
|||||| ||||| || || || || || || || | ||| || ||| | ||
Sbjct 2739376 GTACATCGAGTTCGTCGCCGACCGCCTCCT---CGTCGCTCTCGGCAACGAGAAGGTCTA 2739432
Query 125786 CAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTT 125845
| |||| || |||||||| |||||| | ||| || || | || |||||||||||
Sbjct 2739433 CCGTGCCACCAACCCCTTTGACTTCATGGAGAACATCTCCCTGGGCGGCAAGACCAACTT 2739492
Query 125846 TTTCGAGAAGAAGGTCAGCGAGTAC 125870
||||||||| ||| ||||||||
Sbjct 2739493 CTTCGAGAAGCGCGTCGGCGAGTAC 2739517
Score = 131 bits (144), Expect = 2e-25
Identities = 199/281 (71%), Gaps = 2/281 (1%)
Strand=Plus/Plus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| |||||||||| ||||| |||| || || ||||| | ||| ||| |||||||
Sbjct 2738608 ATCTGGCAAATGTACAAGAAGGCCGAGGCATCTTTCTGGACTGCCGAGGAGATCGATCTC 2738667
Query 125079 TCCAAGGACCTGTACGATTGGGAGA-CTCGTTTGACTGAAACTGAGCGAGAGTTTATATC 125137
|||||||| || |||| ||| | | | | | || || |||| | || || ||
Sbjct 2738668 TCCAAGGATCTCCACGACTGGAACAACAAGATCAAC-GAGGATGAGAAGTACTTCATCTC 2738726
Query 125138 GCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACG 125197
|||||| |||||||||| |||| ||| || || ||||||||||| || ||| | ||
Sbjct 2738727 GCACATCCTGGCCTTCTTCGCCGCCTCGGACGGCATCGTCAACGAGAACCTGGTCGAGCG 2738786
Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGAT 125257
||| ||| | ||||| |||| | ||||| ||||| ||||| ||||||||
Sbjct 2738787 CTTCAGCGGCGAGGTCCAGATTCCCGAGGCGCGCTGCTTCTACGGCTTCCAGATCATGAT 2738846
Query 125258 TGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACA 125298
|||||| | ||||| || | ||||| || |||||||
Sbjct 2738847 GGAGAACATCCACTCCGAGACCTACTCGCTGCTCATTGACA 2738887
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741057597459480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |