Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23] 173 sequences; 38,835,037 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq22 165 1e-35 seq3 143 4e-29 >seq22 Length=534521 Score = 165 bits (182), Expect = 1e-35 Identities = 351/519 (68%), Gaps = 4/519 (1%) Strand=Plus/Plus Query 96865 GATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTT 96924 ||||||| ||||||||||| || | || |||||| | ||| | ||| | || || | Sbjct 117083 GATACGTCGACCAGGGCGGCAACAAGAGACCTGGCGCTTTCGCCATTTACCTCGAGCCCT 117142 Query 96925 GGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCAC 96984 |||||||||| || ||||| || |||| | ||||| ||| ||| || ||| | Sbjct 117143 GGCACGCGGATGTCTTTGAGTTCCTCGACCTCCGCAAGAACCACGGCAAGGAGGAGATCC 117202 Query 96985 GAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACG 97044 | ||| | || | || || |||||| | || || ||||||||||||| ||| | Sbjct 117203 GTGCCCGTGATCTCTTCCTCGCCCTCTGGATTCCCGACCTGTTCATGAAGCGTGTCGAGA 117262 Query 97045 ACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGG 97104 | ||| | |||| || ||||| ||| || || || || || ||||| | | Sbjct 117263 AGAACGGCGAGTGGACTCTCATGTGTCCCAACGAGTGCCCTGGCCTCGCCGATGTGTACG 117322 Query 97105 GCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGACGA 97163 |||| ||||| ||||| |||| | |||||| ||||| || ||| ||| || Sbjct 117323 GCGACGAGTTCGAGGCTCTGTACGAGAAGTACGAGGCCGAGGGTCGTGGTCGTCAGAAGA 117382 Query 97164 GTCGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCC 97222 || | || | |||| |||||| | |||||| | ||||||| ||||| || | || Sbjct 117383 -TCAAGGC-CCAGAAGCTGTGGTACGCCATCCTCGAGGCTCAGACTGAGACCGGTAACCC 117440 Query 97223 GTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCAT 97282 | ||| |||||||||||| | | || ||||| |||||||| ||||||| ||||| Sbjct 117441 TTTCATGCTCTACAAGGATGCTGCCAACCGCAAGAGCAACCAGAAGAACTTGGGAACCAT 117500 Query 97283 CAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGT 97342 | ||||||| || ||||| || || | |||||| | | || || ||| || || Sbjct 117501 CCGCAGCTCCAACCTCTGCACTGAGATCATCGAGTACTCTGCCCCCGATGAGGTCGCTGT 117560 Query 97343 TTGCGTTCTGGCATCGGTCAATCTGCCCAAGTTTGTAGA 97381 ||| | |||| || | ||||||| |||| || || Sbjct 117561 CTGCAATTTGGCTTCCCTGGCTCTGCCCCAGTTCGTTGA 117599 >seq3 Length=3980562 Score = 143 bits (158), Expect = 4e-29 Identities = 301/445 (68%), Gaps = 23/445 (5%) Strand=Plus/Plus Query 125433 GCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTC 125492 || || || || || ||||| |||||||| ||| || || ||||||| |||||| Sbjct 2739089 GCCTTTGCTGCGGTCGAGGGTATCTTCTTCAGCGGTGCCTTCGCCTCCATCTTCTGGCTC 2739148 Query 125493 AAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAG 125552 ||||||||||| ||||||||||| || || | |||||| | || || || |||||| Sbjct 2739149 AAGAAGCGCGGCCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCGCGTGACGAG 2739208 Query 125553 GGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACTATCTGCGTCCCGAGTGCAG 125611 ||||| ||| |||||||||| || ||||| || || || | || | | Sbjct 2739209 GGCCTCCACACTGACTTTGCCTGCCTCCTGTTCTCCCACCT----------CAAGAACCG 2739258 Query 125612 ATCCAGCGATGAAAAGGTCATC---AACATTGTAACCGATGCCGTGAGGATAGAACAAGA 125668 ||||| | ||| || || | || | | |||||| || | ||| ||||| || Sbjct 2739259 CCCCAGC---AAGAAGCTCGTCGAGGAGATCATCATCGATGCTGTCAAGATCGAACAGGA 2739315 Query 125669 GTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGA 125728 ||| || ||||| | || || | | || |||||||||||| || || ||| | Sbjct 2739316 GTTCCTTACCGAGGCTCTGCCCTGCGCCCTGCTTGGCATGAACTCGAACCTCATGAAGCA 2739375 Query 125729 GTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGC--CG-CAAGATTTA 125785 |||||| ||||| || || || || || || || | ||| || ||| | || Sbjct 2739376 GTACATCGAGTTCGTCGCCGACCGCCTCCT---CGTCGCTCTCGGCAACGAGAAGGTCTA 2739432 Query 125786 CAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTT 125845 | |||| || |||||||| |||||| | ||| || || | || ||||||||||| Sbjct 2739433 CCGTGCCACCAACCCCTTTGACTTCATGGAGAACATCTCCCTGGGCGGCAAGACCAACTT 2739492 Query 125846 TTTCGAGAAGAAGGTCAGCGAGTAC 125870 ||||||||| ||| |||||||| Sbjct 2739493 CTTCGAGAAGCGCGTCGGCGAGTAC 2739517 Score = 131 bits (144), Expect = 2e-25 Identities = 199/281 (71%), Gaps = 2/281 (1%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||| ||||| |||| || || ||||| | ||| ||| ||||||| Sbjct 2738608 ATCTGGCAAATGTACAAGAAGGCCGAGGCATCTTTCTGGACTGCCGAGGAGATCGATCTC 2738667 Query 125079 TCCAAGGACCTGTACGATTGGGAGA-CTCGTTTGACTGAAACTGAGCGAGAGTTTATATC 125137 |||||||| || |||| ||| | | | | | || || |||| | || || || Sbjct 2738668 TCCAAGGATCTCCACGACTGGAACAACAAGATCAAC-GAGGATGAGAAGTACTTCATCTC 2738726 Query 125138 GCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACG 125197 |||||| |||||||||| |||| ||| || || ||||||||||| || ||| | || Sbjct 2738727 GCACATCCTGGCCTTCTTCGCCGCCTCGGACGGCATCGTCAACGAGAACCTGGTCGAGCG 2738786 Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGAT 125257 ||| ||| | ||||| |||| | ||||| ||||| ||||| |||||||| Sbjct 2738787 CTTCAGCGGCGAGGTCCAGATTCCCGAGGCGCGCTGCTTCTACGGCTTCCAGATCATGAT 2738846 Query 125258 TGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACA 125298 |||||| | ||||| || | ||||| || ||||||| Sbjct 2738847 GGAGAACATCCACTCCGAGACCTACTCGCTGCTCATTGACA 2738887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741057597459480